Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.04□□□□□ -0.16
SUMO3P55854 AC190387.1-201ENST00000551683 408 ntBASIC14.04□□□□□ -0.16
SUMO3P55854 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
SUMO3P55854 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.04□□□□□ -0.16
SUMO3P55854 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.04□□□□□ -0.16
SUMO3P55854 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.04□□□□□ -0.16
SUMO3P55854 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.04□□□□□ -0.16
SUMO3P55854 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.04□□□□□ -0.16
SUMO3P55854 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SUMO3P55854 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SUMO3P55854 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
SUMO3P55854 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SUMO3P55854 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SUMO3P55854 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.04□□□□□ -0.16
SUMO3P55854 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SUMO3P55854 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SUMO3P55854 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SUMO3P55854 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.04□□□□□ -0.16
SUMO3P55854 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.04□□□□□ -0.16
SUMO3P55854 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SUMO3P55854 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SUMO3P55854 NORAD-201ENST00000565493 5339 ntBASIC14.04□□□□□ -0.16
SUMO3P55854 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SUMO3P55854 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.03□□□□□ -0.16
SUMO3P55854 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SUMO3P55854 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.03□□□□□ -0.16
SUMO3P55854 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.03□□□□□ -0.16
SUMO3P55854 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.03□□□□□ -0.16
SUMO3P55854 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SUMO3P55854 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.03□□□□□ -0.16
SUMO3P55854 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.03□□□□□ -0.16
SUMO3P55854 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.03□□□□□ -0.16
SUMO3P55854 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.03□□□□□ -0.16
SUMO3P55854 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 SOCS2P1-201ENST00000417727 557 ntBASIC14.03□□□□□ -0.16
SUMO3P55854 NUS1P3-201ENST00000423502 862 ntBASIC14.03□□□□□ -0.16
SUMO3P55854 MYCLP2-201ENST00000449268 967 ntBASIC14.03□□□□□ -0.16
SUMO3P55854 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.03□□□□□ -0.16
SUMO3P55854 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.03□□□□□ -0.16
SUMO3P55854 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.03□□□□□ -0.16
SUMO3P55854 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.03□□□□□ -0.16
SUMO3P55854 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.03□□□□□ -0.16
SUMO3P55854 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.03□□□□□ -0.16
SUMO3P55854 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SUMO3P55854 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.03□□□□□ -0.16
SUMO3P55854 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.03□□□□□ -0.16
SUMO3P55854 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.03□□□□□ -0.16
SUMO3P55854 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.03□□□□□ -0.16
SUMO3P55854 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.03□□□□□ -0.16
SUMO3P55854 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SUMO3P55854 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.03□□□□□ -0.16
SUMO3P55854 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.03□□□□□ -0.16
SUMO3P55854 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.03□□□□□ -0.16
SUMO3P55854 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.03□□□□□ -0.16
SUMO3P55854 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.03□□□□□ -0.16
SUMO3P55854 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SUMO3P55854 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SUMO3P55854 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.03□□□□□ -0.16
SUMO3P55854 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SUMO3P55854 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SUMO3P55854 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SUMO3P55854 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
SUMO3P55854 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SUMO3P55854 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SUMO3P55854 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SUMO3P55854 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SUMO3P55854 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.02□□□□□ -0.16
SUMO3P55854 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SUMO3P55854 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.02□□□□□ -0.16
SUMO3P55854 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SUMO3P55854 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.02□□□□□ -0.16
SUMO3P55854 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SUMO3P55854 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SUMO3P55854 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SUMO3P55854 AL138799.1-201ENST00000448213 1675 ntBASIC14.02□□□□□ -0.16
SUMO3P55854 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SUMO3P55854 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms