Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH4P55283 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH4P55283 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
CDH4P55283 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
CDH4P55283 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDH4P55283 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
CDH4P55283 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH4P55283 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CDH4P55283 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH4P55283 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH4P55283 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH4P55283 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH4P55283 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
CDH4P55283 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH4P55283 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH4P55283 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH4P55283 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CDH4P55283 TDH-203ENST00000531764 1110 ntBASIC15.83■□□□□ 0.12
CDH4P55283 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH4P55283 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH4P55283 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH4P55283 MIR5189-201ENST00000577370 114 ntBASIC15.83■□□□□ 0.12
CDH4P55283 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH4P55283 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH4P55283 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH4P55283 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH4P55283 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH4P55283 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH4P55283 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH4P55283 AC093525.8-201ENST00000624099 1342 ntBASIC15.83■□□□□ 0.12
CDH4P55283 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH4P55283 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH4P55283 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH4P55283 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH4P55283 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH4P55283 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH4P55283 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH4P55283 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH4P55283 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH4P55283 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH4P55283 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH4P55283 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH4P55283 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CDH4P55283 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CDH4P55283 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CDH4P55283 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDH4P55283 AC104457.1-201ENST00000401024 814 ntBASIC15.82■□□□□ 0.12
CDH4P55283 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 NUS1P3-201ENST00000423502 862 ntBASIC15.82■□□□□ 0.12
CDH4P55283 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH4P55283 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CDH4P55283 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 PTP4A1P2-201ENST00000546033 454 ntBASIC15.82■□□□□ 0.12
CDH4P55283 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH4P55283 SAMD11P1-201ENST00000571429 661 ntBASIC15.82■□□□□ 0.12
CDH4P55283 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.82■□□□□ 0.12
CDH4P55283 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CDH4P55283 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.82■□□□□ 0.12
CDH4P55283 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CDH4P55283 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH4P55283 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH4P55283 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH4P55283 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH4P55283 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CDH4P55283 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CDH4P55283 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CDH4P55283 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH4P55283 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDH4P55283 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH4P55283 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH4P55283 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH4P55283 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CDH4P55283 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH4P55283 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH4P55283 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDH4P55283 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH4P55283 AL645937.2-201ENST00000396808 931 ntBASIC15.81■□□□□ 0.12
CDH4P55283 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDH4P55283 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.81■□□□□ 0.12
CDH4P55283 GHSR-202ENST00000427970 912 ntBASIC15.81■□□□□ 0.12
CDH4P55283 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms