Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
EFNA3P52797 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.52□□□□□ -0.08
EFNA3P52797 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.52□□□□□ -0.08
EFNA3P52797 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
EFNA3P52797 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.52□□□□□ -0.09
EFNA3P52797 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
EFNA3P52797 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.52□□□□□ -0.09
EFNA3P52797 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.52□□□□□ -0.09
EFNA3P52797 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.09
EFNA3P52797 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
EFNA3P52797 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
EFNA3P52797 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.52□□□□□ -0.09
EFNA3P52797 AL512343.1-201ENST00000605837 169 ntBASIC14.52□□□□□ -0.09
EFNA3P52797 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.52□□□□□ -0.09
EFNA3P52797 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
EFNA3P52797 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.52□□□□□ -0.09
EFNA3P52797 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
EFNA3P52797 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
EFNA3P52797 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.52□□□□□ -0.09
EFNA3P52797 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.52□□□□□ -0.09
EFNA3P52797 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
EFNA3P52797 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
EFNA3P52797 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
EFNA3P52797 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
EFNA3P52797 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
EFNA3P52797 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
EFNA3P52797 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.52□□□□□ -0.09
EFNA3P52797 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
EFNA3P52797 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
EFNA3P52797 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
EFNA3P52797 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
EFNA3P52797 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.51□□□□□ -0.09
EFNA3P52797 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
EFNA3P52797 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.51□□□□□ -0.09
EFNA3P52797 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
EFNA3P52797 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
EFNA3P52797 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
EFNA3P52797 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
EFNA3P52797 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.51□□□□□ -0.09
EFNA3P52797 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.51□□□□□ -0.09
EFNA3P52797 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 AC093433.1-201ENST00000458048 571 ntBASIC14.51□□□□□ -0.09
EFNA3P52797 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.51□□□□□ -0.09
EFNA3P52797 RPL13AP25-201ENST00000484130 612 ntBASIC14.51□□□□□ -0.09
EFNA3P52797 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.51□□□□□ -0.09
EFNA3P52797 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.51□□□□□ -0.09
EFNA3P52797 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.51□□□□□ -0.09
EFNA3P52797 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 SLC25A47P1-201ENST00000531577 414 ntBASIC14.51□□□□□ -0.09
EFNA3P52797 TDH-203ENST00000531764 1110 ntBASIC14.51□□□□□ -0.09
EFNA3P52797 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.51□□□□□ -0.09
EFNA3P52797 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.51□□□□□ -0.09
EFNA3P52797 AC106886.1-201ENST00000568660 600 ntBASIC14.51□□□□□ -0.09
EFNA3P52797 MIR4259-201ENST00000584466 101 ntBASIC14.51□□□□□ -0.09
EFNA3P52797 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.51□□□□□ -0.09
EFNA3P52797 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
EFNA3P52797 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
EFNA3P52797 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
EFNA3P52797 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
EFNA3P52797 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
EFNA3P52797 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
EFNA3P52797 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 AC018665.1-201ENST00000622927 1362 ntBASIC14.5□□□□□ -0.09
EFNA3P52797 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
EFNA3P52797 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.5□□□□□ -0.09
EFNA3P52797 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.5□□□□□ -0.09
EFNA3P52797 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
EFNA3P52797 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
EFNA3P52797 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
EFNA3P52797 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
EFNA3P52797 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.5□□□□□ -0.09
EFNA3P52797 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
EFNA3P52797 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
EFNA3P52797 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms