Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LHX2P50458 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.82□□□□□ -0.2
LHX2P50458 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.82□□□□□ -0.2
LHX2P50458 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.82□□□□□ -0.2
LHX2P50458 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.82□□□□□ -0.2
LHX2P50458 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.82□□□□□ -0.2
LHX2P50458 MIR1909-201ENST00000411312 80 ntBASIC13.82□□□□□ -0.2
LHX2P50458 NUS1P3-201ENST00000423502 862 ntBASIC13.82□□□□□ -0.2
LHX2P50458 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.82□□□□□ -0.2
LHX2P50458 AC022210.1-201ENST00000449856 793 ntBASIC13.82□□□□□ -0.2
LHX2P50458 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.82□□□□□ -0.2
LHX2P50458 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 KRT18P25-201ENST00000508931 1278 ntBASIC13.82□□□□□ -0.2
LHX2P50458 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LHX2P50458 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.82□□□□□ -0.2
LHX2P50458 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.82□□□□□ -0.2
LHX2P50458 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.82□□□□□ -0.2
LHX2P50458 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.82□□□□□ -0.2
LHX2P50458 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.82□□□□□ -0.2
LHX2P50458 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LHX2P50458 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.82□□□□□ -0.2
LHX2P50458 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.82□□□□□ -0.2
LHX2P50458 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LHX2P50458 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
LHX2P50458 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.82□□□□□ -0.2
LHX2P50458 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.82□□□□□ -0.2
LHX2P50458 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LHX2P50458 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LHX2P50458 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.81□□□□□ -0.2
LHX2P50458 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.81□□□□□ -0.2
LHX2P50458 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LHX2P50458 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LHX2P50458 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LHX2P50458 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
LHX2P50458 RNU1-114P-201ENST00000365297 166 ntBASIC13.81□□□□□ -0.2
LHX2P50458 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.81□□□□□ -0.2
LHX2P50458 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LHX2P50458 AL645937.2-201ENST00000396808 931 ntBASIC13.81□□□□□ -0.2
LHX2P50458 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.81□□□□□ -0.2
LHX2P50458 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LHX2P50458 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LHX2P50458 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.81□□□□□ -0.2
LHX2P50458 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LHX2P50458 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.81□□□□□ -0.2
LHX2P50458 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LHX2P50458 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.81□□□□□ -0.2
LHX2P50458 SNX29P1-201ENST00000548357 1007 ntBASIC13.81□□□□□ -0.2
LHX2P50458 SAMD11P1-201ENST00000571429 661 ntBASIC13.81□□□□□ -0.2
LHX2P50458 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.81□□□□□ -0.2
LHX2P50458 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.81□□□□□ -0.2
LHX2P50458 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 PRSS30P-206ENST00000641773 873 ntBASIC13.81□□□□□ -0.2
LHX2P50458 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.81□□□□□ -0.2
LHX2P50458 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.81□□□□□ -0.2
LHX2P50458 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.81□□□□□ -0.2
LHX2P50458 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.81□□□□□ -0.2
LHX2P50458 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LHX2P50458 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.81□□□□□ -0.2
LHX2P50458 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
LHX2P50458 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.81□□□□□ -0.2
LHX2P50458 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
LHX2P50458 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.81□□□□□ -0.2
LHX2P50458 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LHX2P50458 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
LHX2P50458 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms