Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 AL365209.1-201ENST00000624418 6473 ntBASIC13.88□□□□□ -0.19
CSNK1A1P48729 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 CYMP-203ENST00000474680 1263 ntBASIC13.88□□□□□ -0.19
CSNK1A1P48729 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 AC022144.1-201ENST00000602255 1580 ntBASIC13.88□□□□□ -0.19
CSNK1A1P48729 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 AC013268.4-201ENST00000637413 2228 ntBASIC13.87□□□□□ -0.19
CSNK1A1P48729 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 C18orf15-201ENST00000623680 2534 ntBASIC13.87□□□□□ -0.19
CSNK1A1P48729 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 RPL5P21-201ENST00000404620 815 ntBASIC13.87□□□□□ -0.19
CSNK1A1P48729 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 AC114501.2-201ENST00000439631 535 ntBASIC13.87□□□□□ -0.19
CSNK1A1P48729 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 AC004890.2-204ENST00000481968 304 ntBASIC13.87□□□□□ -0.19
CSNK1A1P48729 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 AC015910.1-201ENST00000579400 975 ntBASIC13.87□□□□□ -0.19
CSNK1A1P48729 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 AC005498.2-205ENST00000593218 784 ntBASIC13.87□□□□□ -0.19
CSNK1A1P48729 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 AL390955.2-201ENST00000603032 514 ntBASIC13.87□□□□□ -0.19
CSNK1A1P48729 AC004461.2-201ENST00000629517 803 ntBASIC13.87□□□□□ -0.19
CSNK1A1P48729 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 AC084364.1-201ENST00000551967 1556 ntBASIC13.87□□□□□ -0.19
CSNK1A1P48729 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSNK1A1P48729 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CSNK1A1P48729 AC144831.1-201ENST00000573312 2656 ntBASIC13.87□□□□□ -0.19
CSNK1A1P48729 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSNK1A1P48729 DBET-201ENST00000630918 3363 ntBASIC13.86□□□□□ -0.19
CSNK1A1P48729 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CSNK1A1P48729 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms