Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.49■□□□□ 0.23
CTNNA1P35221 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTNNA1P35221 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CTNNA1P35221 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.49■□□□□ 0.23
CTNNA1P35221 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.49■□□□□ 0.23
CTNNA1P35221 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTNNA1P35221 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTNNA1P35221 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.49■□□□□ 0.23
CTNNA1P35221 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.49■□□□□ 0.23
CTNNA1P35221 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTNNA1P35221 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
CTNNA1P35221 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTNNA1P35221 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.48■□□□□ 0.23
CTNNA1P35221 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTNNA1P35221 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTNNA1P35221 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.48■□□□□ 0.23
CTNNA1P35221 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTNNA1P35221 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CTNNA1P35221 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTNNA1P35221 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.48■□□□□ 0.23
CTNNA1P35221 AC104581.4-201ENST00000623126 3052 ntBASIC16.48■□□□□ 0.23
CTNNA1P35221 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CTNNA1P35221 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CTNNA1P35221 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTNNA1P35221 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CTNNA1P35221 MIR574-201ENST00000385209 96 ntBASIC16.48■□□□□ 0.23
CTNNA1P35221 AL353705.2-201ENST00000428243 662 ntBASIC16.48■□□□□ 0.23
CTNNA1P35221 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.48■□□□□ 0.23
CTNNA1P35221 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CTNNA1P35221 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.48■□□□□ 0.23
CTNNA1P35221 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTNNA1P35221 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.48■□□□□ 0.23
CTNNA1P35221 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTNNA1P35221 AC105339.1-204ENST00000636249 355 ntBASIC16.48■□□□□ 0.23
CTNNA1P35221 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.48■□□□□ 0.23
CTNNA1P35221 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.48■□□□□ 0.23
CTNNA1P35221 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.48■□□□□ 0.23
CTNNA1P35221 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTNNA1P35221 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CTNNA1P35221 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTNNA1P35221 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTNNA1P35221 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTNNA1P35221 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.48■□□□□ 0.23
CTNNA1P35221 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CTNNA1P35221 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTNNA1P35221 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.48■□□□□ 0.23
CTNNA1P35221 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.48■□□□□ 0.23
CTNNA1P35221 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTNNA1P35221 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CTNNA1P35221 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.47■□□□□ 0.23
CTNNA1P35221 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CTNNA1P35221 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.47■□□□□ 0.23
CTNNA1P35221 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 ELL2P1-201ENST00000413990 1906 ntBASIC16.47■□□□□ 0.23
CTNNA1P35221 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.47■□□□□ 0.23
CTNNA1P35221 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CTNNA1P35221 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CTNNA1P35221 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CTNNA1P35221 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.47■□□□□ 0.23
CTNNA1P35221 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 HIST3H2BA-201ENST00000436555 524 ntBASIC16.47■□□□□ 0.23
CTNNA1P35221 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.47■□□□□ 0.23
CTNNA1P35221 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.47■□□□□ 0.23
CTNNA1P35221 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.47■□□□□ 0.23
CTNNA1P35221 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.47■□□□□ 0.23
CTNNA1P35221 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.47■□□□□ 0.23
CTNNA1P35221 AC105021.1-202ENST00000570572 669 ntBASIC16.47■□□□□ 0.23
CTNNA1P35221 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.47■□□□□ 0.23
CTNNA1P35221 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.47■□□□□ 0.23
CTNNA1P35221 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CTNNA1P35221 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CTNNA1P35221 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CTNNA1P35221 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.47■□□□□ 0.23
CTNNA1P35221 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.47■□□□□ 0.23
CTNNA1P35221 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CTNNA1P35221 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.47■□□□□ 0.23
CTNNA1P35221 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.47■□□□□ 0.23
CTNNA1P35221 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CTNNA1P35221 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.47■□□□□ 0.23
CTNNA1P35221 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTNNA1P35221 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.47■□□□□ 0.23
CTNNA1P35221 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms