Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.42■□□□□ 0.38
CIITAP33076 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CIITAP33076 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CIITAP33076 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CIITAP33076 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.42■□□□□ 0.38
CIITAP33076 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.42■□□□□ 0.38
CIITAP33076 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CIITAP33076 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CIITAP33076 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CIITAP33076 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
CIITAP33076 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CIITAP33076 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CIITAP33076 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CIITAP33076 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.42■□□□□ 0.38
CIITAP33076 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.41■□□□□ 0.38
CIITAP33076 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.41■□□□□ 0.38
CIITAP33076 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 AC114812.1-204ENST00000449669 728 ntBASIC17.41■□□□□ 0.38
CIITAP33076 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.41■□□□□ 0.38
CIITAP33076 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.41■□□□□ 0.38
CIITAP33076 AC233724.13-201ENST00000598383 410 ntBASIC17.41■□□□□ 0.38
CIITAP33076 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CIITAP33076 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 PPT1-215ENST00000641471 2368 ntBASIC17.41■□□□□ 0.38
CIITAP33076 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.41■□□□□ 0.38
CIITAP33076 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.41■□□□□ 0.38
CIITAP33076 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CIITAP33076 AC132872.4-202ENST00000622924 2756 ntBASIC17.41■□□□□ 0.38
CIITAP33076 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.41■□□□□ 0.38
CIITAP33076 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CIITAP33076 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CIITAP33076 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.4■□□□□ 0.38
CIITAP33076 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.4■□□□□ 0.38
CIITAP33076 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CIITAP33076 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CIITAP33076 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CIITAP33076 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIITAP33076 AL158070.2-201ENST00000623713 1621 ntBASIC17.4■□□□□ 0.38
CIITAP33076 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CIITAP33076 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIITAP33076 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIITAP33076 AC005229.1-201ENST00000392885 409 ntBASIC17.4■□□□□ 0.38
CIITAP33076 AC079776.1-201ENST00000401540 1152 ntBASIC17.4■□□□□ 0.38
CIITAP33076 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.4■□□□□ 0.38
CIITAP33076 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.4■□□□□ 0.38
CIITAP33076 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.4■□□□□ 0.38
CIITAP33076 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.4■□□□□ 0.38
CIITAP33076 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.4■□□□□ 0.38
CIITAP33076 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.4■□□□□ 0.38
CIITAP33076 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.4■□□□□ 0.38
CIITAP33076 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CIITAP33076 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CIITAP33076 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIITAP33076 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.4■□□□□ 0.38
CIITAP33076 AC134312.5-201ENST00000568031 1313 ntBASIC17.4■□□□□ 0.38
CIITAP33076 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIITAP33076 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CIITAP33076 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CIITAP33076 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CIITAP33076 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CIITAP33076 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.39■□□□□ 0.38
CIITAP33076 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.39■□□□□ 0.38
CIITAP33076 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CIITAP33076 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CIITAP33076 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CIITAP33076 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CIITAP33076 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CIITAP33076 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CIITAP33076 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CIITAP33076 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CIITAP33076 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CIITAP33076 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.39■□□□□ 0.37
CIITAP33076 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CIITAP33076 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CIITAP33076 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CIITAP33076 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CIITAP33076 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CIITAP33076 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CIITAP33076 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CIITAP33076 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CIITAP33076 AL139094.1-201ENST00000405549 1188 ntBASIC17.39■□□□□ 0.37
CIITAP33076 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.39■□□□□ 0.37
CIITAP33076 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms