Protein–RNA interactions for Protein: P32246

CCR1, C-C chemokine receptor type 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1P32246 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR1P32246 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR1P32246 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.07■□□□□ 0.16
CCR1P32246 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR1P32246 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR1P32246 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCR1P32246 NORAD-201ENST00000565493 5339 ntBASIC16.07■□□□□ 0.16
CCR1P32246 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.07■□□□□ 0.16
CCR1P32246 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCR1P32246 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.06■□□□□ 0.16
CCR1P32246 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCR1P32246 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.06■□□□□ 0.16
CCR1P32246 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.06■□□□□ 0.16
CCR1P32246 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CCR1P32246 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCR1P32246 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCR1P32246 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.06■□□□□ 0.16
CCR1P32246 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCR1P32246 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.06■□□□□ 0.16
CCR1P32246 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCR1P32246 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.06■□□□□ 0.16
CCR1P32246 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.06■□□□□ 0.16
CCR1P32246 RN7SL752P-201ENST00000463779 287 ntBASIC16.06■□□□□ 0.16
CCR1P32246 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.06■□□□□ 0.16
CCR1P32246 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.06■□□□□ 0.16
CCR1P32246 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.06■□□□□ 0.16
CCR1P32246 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.06■□□□□ 0.16
CCR1P32246 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCR1P32246 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CCR1P32246 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CCR1P32246 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 AC124283.3-201ENST00000570869 594 ntBASIC16.06■□□□□ 0.16
CCR1P32246 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.06■□□□□ 0.16
CCR1P32246 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCR1P32246 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.06■□□□□ 0.16
CCR1P32246 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.06■□□□□ 0.16
CCR1P32246 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCR1P32246 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.06■□□□□ 0.16
CCR1P32246 AL033527.5-201ENST00000641382 801 ntBASIC16.06■□□□□ 0.16
CCR1P32246 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.06■□□□□ 0.16
CCR1P32246 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 TSPY26P-202ENST00000565928 3884 ntBASIC16.06■□□□□ 0.16
CCR1P32246 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.06■□□□□ 0.16
CCR1P32246 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.06■□□□□ 0.16
CCR1P32246 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.06■□□□□ 0.16
CCR1P32246 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.06■□□□□ 0.16
CCR1P32246 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCR1P32246 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
CCR1P32246 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.05■□□□□ 0.16
CCR1P32246 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCR1P32246 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 KRT8P22-201ENST00000562317 1415 ntBASIC16.05■□□□□ 0.16
CCR1P32246 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCR1P32246 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCR1P32246 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.05■□□□□ 0.16
CCR1P32246 AL162726.2-201ENST00000438986 1017 ntBASIC16.05■□□□□ 0.16
CCR1P32246 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.05■□□□□ 0.16
CCR1P32246 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.05■□□□□ 0.16
CCR1P32246 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.05■□□□□ 0.16
CCR1P32246 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.05■□□□□ 0.16
CCR1P32246 ENPP7P5-201ENST00000541031 1031 ntBASIC16.05■□□□□ 0.16
CCR1P32246 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.05■□□□□ 0.16
CCR1P32246 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.05■□□□□ 0.16
CCR1P32246 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.05■□□□□ 0.16
CCR1P32246 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.05■□□□□ 0.16
CCR1P32246 AC005225.4-201ENST00000557330 545 ntBASIC16.05■□□□□ 0.16
CCR1P32246 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.05■□□□□ 0.16
CCR1P32246 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms