Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.85□□□□□ -0.19
HOXC12P31275 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.85□□□□□ -0.19
HOXC12P31275 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.85□□□□□ -0.19
HOXC12P31275 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.85□□□□□ -0.19
HOXC12P31275 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.85□□□□□ -0.19
HOXC12P31275 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.85□□□□□ -0.19
HOXC12P31275 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
HOXC12P31275 TTTY23B-201ENST00000442790 549 ntBASIC13.85□□□□□ -0.19
HOXC12P31275 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.85□□□□□ -0.19
HOXC12P31275 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.85□□□□□ -0.19
HOXC12P31275 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.85□□□□□ -0.19
HOXC12P31275 AP005482.1-201ENST00000563722 1273 ntBASIC13.85□□□□□ -0.19
HOXC12P31275 MIR4259-201ENST00000584466 101 ntBASIC13.85□□□□□ -0.19
HOXC12P31275 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.85□□□□□ -0.19
HOXC12P31275 SRD5A3P1-201ENST00000603021 949 ntBASIC13.85□□□□□ -0.19
HOXC12P31275 AC004790.1-201ENST00000612686 536 ntBASIC13.85□□□□□ -0.19
HOXC12P31275 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.85□□□□□ -0.19
HOXC12P31275 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.85□□□□□ -0.19
HOXC12P31275 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HOXC12P31275 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.85□□□□□ -0.19
HOXC12P31275 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.85□□□□□ -0.19
HOXC12P31275 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.85□□□□□ -0.19
HOXC12P31275 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HOXC12P31275 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.85□□□□□ -0.19
HOXC12P31275 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.85□□□□□ -0.19
HOXC12P31275 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 AC124067.4-201ENST00000519691 2379 ntBASIC13.85□□□□□ -0.19
HOXC12P31275 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HOXC12P31275 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HOXC12P31275 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HOXC12P31275 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HOXC12P31275 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXC12P31275 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXC12P31275 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXC12P31275 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXC12P31275 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HOXC12P31275 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.84□□□□□ -0.19
HOXC12P31275 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXC12P31275 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXC12P31275 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.84□□□□□ -0.19
HOXC12P31275 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.84□□□□□ -0.19
HOXC12P31275 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.84□□□□□ -0.19
HOXC12P31275 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXC12P31275 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.84□□□□□ -0.19
HOXC12P31275 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.84□□□□□ -0.19
HOXC12P31275 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HOXC12P31275 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HOXC12P31275 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.84□□□□□ -0.19
HOXC12P31275 AC036164.1-201ENST00000570544 333 ntBASIC13.84□□□□□ -0.19
HOXC12P31275 MIR4525-201ENST00000580000 75 ntBASIC13.84□□□□□ -0.19
HOXC12P31275 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXC12P31275 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.84□□□□□ -0.19
HOXC12P31275 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.84□□□□□ -0.19
HOXC12P31275 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
HOXC12P31275 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HOXC12P31275 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.84□□□□□ -0.19
HOXC12P31275 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
HOXC12P31275 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
HOXC12P31275 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms