Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TM4SF1P30408 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TM4SF1P30408 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TM4SF1P30408 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.95■□□□□ 0.62
TM4SF1P30408 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.95■□□□□ 0.62
TM4SF1P30408 AC073150.1-201ENST00000450406 1084 ntBASIC18.95■□□□□ 0.62
TM4SF1P30408 NOC2LP1-201ENST00000450578 752 ntBASIC18.95■□□□□ 0.62
TM4SF1P30408 RN7SL181P-201ENST00000462921 277 ntBASIC18.95■□□□□ 0.62
TM4SF1P30408 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC18.95■□□□□ 0.62
TM4SF1P30408 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.95■□□□□ 0.62
TM4SF1P30408 AC009093.2-202ENST00000620513 2079 ntBASIC18.95■□□□□ 0.62
TM4SF1P30408 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
TM4SF1P30408 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.95■□□□□ 0.62
TM4SF1P30408 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TM4SF1P30408 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TM4SF1P30408 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TM4SF1P30408 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TM4SF1P30408 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF1P30408 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TM4SF1P30408 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF1P30408 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF1P30408 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.94■□□□□ 0.62
TM4SF1P30408 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF1P30408 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF1P30408 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.94■□□□□ 0.62
TM4SF1P30408 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.94■□□□□ 0.62
TM4SF1P30408 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TM4SF1P30408 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.94■□□□□ 0.62
TM4SF1P30408 AL603832.2-201ENST00000566195 2125 ntBASIC18.94■□□□□ 0.62
TM4SF1P30408 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF1P30408 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.94■□□□□ 0.62
TM4SF1P30408 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.94■□□□□ 0.62
TM4SF1P30408 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TM4SF1P30408 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF1P30408 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF1P30408 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TM4SF1P30408 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF1P30408 IGLV3-15-201ENST00000518356 244 ntBASIC18.94■□□□□ 0.62
TM4SF1P30408 CFL1-206ENST00000527344 962 ntTSL 2 BASIC18.94■□□□□ 0.62
TM4SF1P30408 NEU3-205ENST00000531619 582 ntTSL 5 BASIC18.94■□□□□ 0.62
TM4SF1P30408 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.94■□□□□ 0.62
TM4SF1P30408 AC087045.2-201ENST00000606279 1003 ntBASIC18.94■□□□□ 0.62
TM4SF1P30408 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF1P30408 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TM4SF1P30408 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF1P30408 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF1P30408 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF1P30408 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF1P30408 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TM4SF1P30408 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF1P30408 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TM4SF1P30408 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TM4SF1P30408 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF1P30408 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF1P30408 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TM4SF1P30408 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF1P30408 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.93■□□□□ 0.62
TM4SF1P30408 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.93■□□□□ 0.62
TM4SF1P30408 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF1P30408 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC18.93■□□□□ 0.62
TM4SF1P30408 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TM4SF1P30408 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF1P30408 RPSAP31-201ENST00000416648 895 ntBASIC18.93■□□□□ 0.62
TM4SF1P30408 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.93■□□□□ 0.62
TM4SF1P30408 AC114501.1-201ENST00000445949 172 ntBASIC18.93■□□□□ 0.62
TM4SF1P30408 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TM4SF1P30408 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.93■□□□□ 0.62
TM4SF1P30408 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.93■□□□□ 0.62
TM4SF1P30408 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC18.93■□□□□ 0.62
TM4SF1P30408 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF1P30408 COX6A1P2-201ENST00000620597 330 ntBASIC18.93■□□□□ 0.62
TM4SF1P30408 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TM4SF1P30408 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.93■□□□□ 0.62
TM4SF1P30408 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.93■□□□□ 0.62
TM4SF1P30408 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF1P30408 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF1P30408 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF1P30408 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF1P30408 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TM4SF1P30408 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF1P30408 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF1P30408 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TM4SF1P30408 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM4SF1P30408 AC006449.5-201ENST00000610658 2098 ntBASIC18.93■□□□□ 0.62
TM4SF1P30408 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM4SF1P30408 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms