Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PTPN3P26045 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN3P26045 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN3P26045 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN3P26045 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN3P26045 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
PTPN3P26045 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PTPN3P26045 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.86■□□□□ 0.13
PTPN3P26045 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.85■□□□□ 0.13
PTPN3P26045 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PTPN3P26045 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PTPN3P26045 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
PTPN3P26045 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PTPN3P26045 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 MROH4P-201ENST00000431302 1578 ntBASIC15.85■□□□□ 0.13
PTPN3P26045 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.85■□□□□ 0.13
PTPN3P26045 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PTPN3P26045 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN3P26045 MRPS18AP1-201ENST00000414458 589 ntBASIC15.85■□□□□ 0.13
PTPN3P26045 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN3P26045 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN3P26045 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 AC093214.1-201ENST00000511688 1107 ntBASIC15.85■□□□□ 0.13
PTPN3P26045 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN3P26045 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.85■□□□□ 0.13
PTPN3P26045 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN3P26045 SRD5A3P1-201ENST00000603021 949 ntBASIC15.85■□□□□ 0.13
PTPN3P26045 AC000095.1-201ENST00000603208 874 ntBASIC15.85■□□□□ 0.13
PTPN3P26045 AL391069.4-201ENST00000609583 481 ntBASIC15.85■□□□□ 0.13
PTPN3P26045 AC004790.1-201ENST00000612686 536 ntBASIC15.85■□□□□ 0.13
PTPN3P26045 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN3P26045 AL158212.4-201ENST00000624062 1286 ntBASIC15.85■□□□□ 0.13
PTPN3P26045 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PTPN3P26045 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.85■□□□□ 0.13
PTPN3P26045 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PTPN3P26045 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
PTPN3P26045 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PTPN3P26045 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PTPN3P26045 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PTPN3P26045 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
PTPN3P26045 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN3P26045 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN3P26045 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PTPN3P26045 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN3P26045 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN3P26045 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PTPN3P26045 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PTPN3P26045 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN3P26045 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.84■□□□□ 0.13
PTPN3P26045 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.84■□□□□ 0.13
PTPN3P26045 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 GHSR-202ENST00000427970 912 ntBASIC15.84■□□□□ 0.13
PTPN3P26045 BASP1P1-201ENST00000430708 665 ntBASIC15.84■□□□□ 0.13
PTPN3P26045 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN3P26045 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN3P26045 MEIS3P1-201ENST00000495167 958 ntBASIC15.84■□□□□ 0.13
PTPN3P26045 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.84■□□□□ 0.13
PTPN3P26045 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PTPN3P26045 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PTPN3P26045 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.84■□□□□ 0.13
PTPN3P26045 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN3P26045 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms