Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
XPAP23025 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.7■□□□□ 0.1
XPAP23025 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.7■□□□□ 0.1
XPAP23025 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
XPAP23025 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
XPAP23025 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.7■□□□□ 0.1
XPAP23025 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.7■□□□□ 0.1
XPAP23025 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
XPAP23025 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.7■□□□□ 0.1
XPAP23025 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.7■□□□□ 0.1
XPAP23025 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
XPAP23025 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 COX5BP8-201ENST00000416911 349 ntBASIC15.7■□□□□ 0.1
XPAP23025 AL442647.2-201ENST00000429864 857 ntBASIC15.7■□□□□ 0.1
XPAP23025 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.7■□□□□ 0.1
XPAP23025 GAPDHP21-201ENST00000450301 1010 ntBASIC15.7■□□□□ 0.1
XPAP23025 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
XPAP23025 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.7■□□□□ 0.1
XPAP23025 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
XPAP23025 AC015910.1-201ENST00000579400 975 ntBASIC15.7■□□□□ 0.1
XPAP23025 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.7■□□□□ 0.1
XPAP23025 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
XPAP23025 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
XPAP23025 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.7■□□□□ 0.1
XPAP23025 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 AL033527.5-201ENST00000641382 801 ntBASIC15.7■□□□□ 0.1
XPAP23025 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.7■□□□□ 0.1
XPAP23025 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
XPAP23025 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.7■□□□□ 0.1
XPAP23025 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.7■□□□□ 0.1
XPAP23025 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
XPAP23025 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.7■□□□□ 0.1
XPAP23025 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
XPAP23025 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.7■□□□□ 0.1
XPAP23025 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 AP005117.1-202ENST00000581724 1908 ntBASIC15.69■□□□□ 0.1
XPAP23025 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
XPAP23025 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
XPAP23025 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
XPAP23025 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.69■□□□□ 0.1
XPAP23025 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.69■□□□□ 0.1
XPAP23025 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 INE1-201ENST00000456273 945 ntBASIC15.69■□□□□ 0.1
XPAP23025 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
XPAP23025 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.69■□□□□ 0.1
XPAP23025 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.69■□□□□ 0.1
XPAP23025 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.69■□□□□ 0.1
XPAP23025 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.69■□□□□ 0.1
XPAP23025 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.69■□□□□ 0.1
XPAP23025 WFDC1-204ENST00000613603 549 ntBASIC15.69■□□□□ 0.1
XPAP23025 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
XPAP23025 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.69■□□□□ 0.1
XPAP23025 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.69■□□□□ 0.1
XPAP23025 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XPAP23025 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms