Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.96■□□□□ 0.15
HMGA1P17096 MIR6787-201ENST00000616675 61 ntBASIC15.96■□□□□ 0.15
HMGA1P17096 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA1P17096 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA1P17096 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HMGA1P17096 REXO1L5P-201ENST00000622260 2098 ntBASIC15.96■□□□□ 0.15
HMGA1P17096 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.96■□□□□ 0.14
HMGA1P17096 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HMGA1P17096 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGA1P17096 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGA1P17096 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HMGA1P17096 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGA1P17096 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HMGA1P17096 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HMGA1P17096 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HMGA1P17096 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HMGA1P17096 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGA1P17096 CNN2P10-201ENST00000443067 918 ntBASIC15.95■□□□□ 0.14
HMGA1P17096 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 ZNF767P-206ENST00000513792 565 ntBASIC15.95■□□□□ 0.14
HMGA1P17096 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
HMGA1P17096 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGA1P17096 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGA1P17096 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGA1P17096 AC091271.1-201ENST00000611877 1162 ntBASIC15.95■□□□□ 0.14
HMGA1P17096 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.95■□□□□ 0.14
HMGA1P17096 AL603764.1-201ENST00000636452 321 ntBASIC15.95■□□□□ 0.14
HMGA1P17096 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 AC020907.1-201ENST00000616460 1350 ntBASIC15.95■□□□□ 0.14
HMGA1P17096 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGA1P17096 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.95■□□□□ 0.14
HMGA1P17096 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HMGA1P17096 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HMGA1P17096 MST1L-201ENST00000442552 2185 ntBASIC15.94■□□□□ 0.14
HMGA1P17096 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HMGA1P17096 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HMGA1P17096 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGA1P17096 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGA1P17096 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 AL354989.2-201ENST00000435838 1540 ntBASIC15.94■□□□□ 0.14
HMGA1P17096 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGA1P17096 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
HMGA1P17096 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGA1P17096 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 GHSR-202ENST00000427970 912 ntBASIC15.94■□□□□ 0.14
HMGA1P17096 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGA1P17096 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.94■□□□□ 0.14
HMGA1P17096 HOMER2P2-201ENST00000451621 847 ntBASIC15.94■□□□□ 0.14
HMGA1P17096 Z93015.1-201ENST00000451718 390 ntBASIC15.94■□□□□ 0.14
HMGA1P17096 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.94■□□□□ 0.14
HMGA1P17096 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGA1P17096 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGA1P17096 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.94■□□□□ 0.14
HMGA1P17096 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.94■□□□□ 0.14
HMGA1P17096 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.94■□□□□ 0.14
HMGA1P17096 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.94■□□□□ 0.14
HMGA1P17096 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
HMGA1P17096 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.94■□□□□ 0.14
HMGA1P17096 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.94■□□□□ 0.14
HMGA1P17096 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.94■□□□□ 0.14
HMGA1P17096 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGA1P17096 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGA1P17096 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.94■□□□□ 0.14
HMGA1P17096 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HMGA1P17096 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HMGA1P17096 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms