Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RFPL4AP1-201ENST00000530883 850 ntBASIC13.62□□□□□ -0.23
SFTPBP07988 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SFTPBP07988 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.62□□□□□ -0.23
SFTPBP07988 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.62□□□□□ -0.23
SFTPBP07988 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SFTPBP07988 AC009093.7-201ENST00000623853 1223 ntBASIC13.62□□□□□ -0.23
SFTPBP07988 LINC00628-201ENST00000628516 1289 ntBASIC13.62□□□□□ -0.23
SFTPBP07988 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.62□□□□□ -0.23
SFTPBP07988 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SFTPBP07988 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.62□□□□□ -0.23
SFTPBP07988 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SFTPBP07988 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SFTPBP07988 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SFTPBP07988 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.62□□□□□ -0.23
SFTPBP07988 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SFTPBP07988 AL691432.1-201ENST00000596308 1422 ntBASIC13.62□□□□□ -0.23
SFTPBP07988 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SFTPBP07988 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SFTPBP07988 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SFTPBP07988 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.62□□□□□ -0.23
SFTPBP07988 BNIP3P1-202ENST00000550043 1585 ntBASIC13.62□□□□□ -0.23
SFTPBP07988 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SFTPBP07988 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SFTPBP07988 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.62□□□□□ -0.23
SFTPBP07988 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SFTPBP07988 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.61□□□□□ -0.23
SFTPBP07988 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.61□□□□□ -0.23
SFTPBP07988 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.61□□□□□ -0.23
SFTPBP07988 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.61□□□□□ -0.23
SFTPBP07988 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SFTPBP07988 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.61□□□□□ -0.23
SFTPBP07988 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SFTPBP07988 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.61□□□□□ -0.23
SFTPBP07988 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.61□□□□□ -0.23
SFTPBP07988 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SFTPBP07988 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 AC105250.1-201ENST00000509378 2057 ntBASIC13.61□□□□□ -0.23
SFTPBP07988 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.61□□□□□ -0.23
SFTPBP07988 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 AL645939.2-201ENST00000427340 991 ntBASIC13.61□□□□□ -0.23
SFTPBP07988 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.61□□□□□ -0.23
SFTPBP07988 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.61□□□□□ -0.23
SFTPBP07988 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.61□□□□□ -0.23
SFTPBP07988 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.61□□□□□ -0.23
SFTPBP07988 AC243562.2-201ENST00000561247 970 ntBASIC13.61□□□□□ -0.23
SFTPBP07988 AL355385.1-201ENST00000606123 409 ntBASIC13.61□□□□□ -0.23
SFTPBP07988 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.61□□□□□ -0.23
SFTPBP07988 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
SFTPBP07988 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.61□□□□□ -0.23
SFTPBP07988 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 TMBIM7P-203ENST00000641617 1718 ntBASIC13.61□□□□□ -0.23
SFTPBP07988 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.61□□□□□ -0.23
SFTPBP07988 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SFTPBP07988 AC087481.3-201ENST00000602886 1894 ntBASIC13.61□□□□□ -0.23
SFTPBP07988 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.61□□□□□ -0.23
SFTPBP07988 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SFTPBP07988 AC006486.2-201ENST00000624246 2199 ntBASIC13.61□□□□□ -0.23
SFTPBP07988 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.6□□□□□ -0.23
SFTPBP07988 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SFTPBP07988 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.6□□□□□ -0.23
SFTPBP07988 AC090616.6-203ENST00000579186 1945 ntBASIC13.6□□□□□ -0.23
SFTPBP07988 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SFTPBP07988 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.6□□□□□ -0.23
SFTPBP07988 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SFTPBP07988 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SFTPBP07988 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SFTPBP07988 CICP4-201ENST00000447359 2812 ntBASIC13.6□□□□□ -0.23
SFTPBP07988 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SFTPBP07988 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SFTPBP07988 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
SFTPBP07988 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SFTPBP07988 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SFTPBP07988 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SFTPBP07988 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
SFTPBP07988 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.6□□□□□ -0.23
SFTPBP07988 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SFTPBP07988 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.6□□□□□ -0.23
SFTPBP07988 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SFTPBP07988 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SFTPBP07988 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
SFTPBP07988 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SFTPBP07988 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms