Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC7O00311 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDC7O00311 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.28■□□□□ 0.04
CDC7O00311 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC7O00311 KRT18P28-201ENST00000453838 1332 ntBASIC15.28■□□□□ 0.04
CDC7O00311 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CDC7O00311 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC7O00311 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.28■□□□□ 0.04
CDC7O00311 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.28■□□□□ 0.04
CDC7O00311 FAM86GP-201ENST00000448322 971 ntBASIC15.28■□□□□ 0.04
CDC7O00311 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC7O00311 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC7O00311 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.28■□□□□ 0.04
CDC7O00311 AL844908.2-201ENST00000609461 460 ntBASIC15.28■□□□□ 0.04
CDC7O00311 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
CDC7O00311 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.28■□□□□ 0.04
CDC7O00311 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDC7O00311 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDC7O00311 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CDC7O00311 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CDC7O00311 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.27■□□□□ 0.04
CDC7O00311 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC7O00311 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC7O00311 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.27■□□□□ 0.04
CDC7O00311 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
CDC7O00311 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.27■□□□□ 0.04
CDC7O00311 AC100757.3-201ENST00000622361 1406 ntBASIC15.27■□□□□ 0.04
CDC7O00311 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC7O00311 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDC7O00311 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC7O00311 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.27■□□□□ 0.04
CDC7O00311 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CDC7O00311 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC7O00311 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC7O00311 AC087499.5-201ENST00000452760 1342 ntBASIC15.27■□□□□ 0.04
CDC7O00311 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDC7O00311 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDC7O00311 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC7O00311 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDC7O00311 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.27■□□□□ 0.04
CDC7O00311 METTL21AP1-201ENST00000438852 635 ntBASIC15.27■□□□□ 0.04
CDC7O00311 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.27■□□□□ 0.04
CDC7O00311 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.27■□□□□ 0.04
CDC7O00311 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.27■□□□□ 0.04
CDC7O00311 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.27■□□□□ 0.04
CDC7O00311 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.27■□□□□ 0.04
CDC7O00311 AC067863.1-201ENST00000494933 530 ntBASIC15.27■□□□□ 0.04
CDC7O00311 SDHAP3-202ENST00000515467 728 ntBASIC15.27■□□□□ 0.04
CDC7O00311 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.27■□□□□ 0.04
CDC7O00311 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDC7O00311 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDC7O00311 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.27■□□□□ 0.04
CDC7O00311 DUX4L27-201ENST00000554796 1261 ntBASIC15.27■□□□□ 0.04
CDC7O00311 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDC7O00311 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC7O00311 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDC7O00311 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC7O00311 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDC7O00311 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC7O00311 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC7O00311 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC7O00311 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDC7O00311 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDC7O00311 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDC7O00311 AC106881.1-201ENST00000605849 3329 ntBASIC15.27■□□□□ 0.03
CDC7O00311 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CDC7O00311 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CDC7O00311 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.26■□□□□ 0.03
CDC7O00311 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CDC7O00311 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.26■□□□□ 0.03
CDC7O00311 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CDC7O00311 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.26■□□□□ 0.03
CDC7O00311 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC7O00311 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CDC7O00311 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 AL133267.1-201ENST00000398220 340 ntBASIC15.26■□□□□ 0.03
CDC7O00311 MIR943-201ENST00000401286 94 ntBASIC15.26■□□□□ 0.03
CDC7O00311 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.26■□□□□ 0.03
CDC7O00311 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.26■□□□□ 0.03
CDC7O00311 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.26■□□□□ 0.03
CDC7O00311 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CDC7O00311 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms