Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 RN7SL81P-201ENST00000493781 261 ntBASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 MIR3180-2-201ENST00000581748 88 ntBASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 RN7SL470P-201ENST00000583069 259 ntBASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 AC009884.2-201ENST00000603110 324 ntBASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 AL157813.1-201ENST00000612996 587 ntBASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 UBALD1-205ENST00000590891 2641 ntBASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 KRT17P4-201ENST00000429445 819 ntBASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 SERBP1P2-201ENST00000436888 1164 ntBASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 AC027139.1-201ENST00000565286 951 ntBASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 FTLP5-201ENST00000586853 534 ntBASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 AC005915.1-201ENST00000624912 2018 ntBASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM88BA6NKF7 IL9RP3-201ENST00000442856 1674 ntBASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 AC136759.1-202ENST00000530858 2194 ntBASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 AL807761.2-201ENST00000422849 729 ntBASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 AL354861.1-201ENST00000445213 355 ntBASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 LINC00634-202ENST00000505157 222 ntBASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 FAM86B3P-203ENST00000523992 854 ntBASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 AC005962.1-201ENST00000584100 773 ntBASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 AC084781.1-201ENST00000613737 656 ntBASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 AP001184.1-201ENST00000637936 376 ntBASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 KRT18P9-201ENST00000604826 1300 ntBASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TMEM88BA6NKF7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms