Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 CICP11-201ENST00000434745 2827 ntBASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.16□□□□□ -0.46
TRAV5A0A0B4J249 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 CYP4F24P-201ENST00000586049 1580 ntBASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 AC002056.1-201ENST00000395613 760 ntBASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 AC007967.2-201ENST00000432613 625 ntBASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 AC079776.4-201ENST00000511039 504 ntBASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 RNA5SP419-201ENST00000515908 135 ntBASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 RN7SL510P-201ENST00000581311 263 ntBASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 AC027307.2-201ENST00000591252 911 ntBASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 AC097359.3-201ENST00000603982 1210 ntBASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.15□□□□□ -0.46
TRAV5A0A0B4J249 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
TRAV5A0A0B4J249 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
TRAV5A0A0B4J249 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.15□□□□□ -0.47
TRAV5A0A0B4J249 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 AC005840.4-201ENST00000541242 2494 ntBASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 RARRES2P8-201ENST00000566335 367 ntBASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 AP001005.1-201ENST00000571755 1248 ntBASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 AC104692.2-201ENST00000603054 253 ntBASIC12.14□□□□□ -0.47
TRAV5A0A0B4J249 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms