Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 AL645933.1-201ENST00000440087 609 ntBASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 AC008805.1-201ENST00000590892 364 ntBASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 AL359258.3-201ENST00000622910 2331 ntBASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 AC003102.2-201ENST00000589195 1469 ntBASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CDC42BPBQ9Y5S2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 COX6A1P2-201ENST00000620597 330 ntBASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 NAP1L6-202ENST00000641404 1222 ntBASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CDC42BPBQ9Y5S2 CYP4F23P-201ENST00000593402 1579 ntBASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC22.84■■□□□ 1.25
CDC42BPBQ9Y5S2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 NEU3-205ENST00000531619 582 ntTSL 5 BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 AC007718.1-201ENST00000621078 280 ntBASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 AL805961.1-201ENST00000642026 753 ntBASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
CDC42BPBQ9Y5S2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC22.83■■□□□ 1.24
CDC42BPBQ9Y5S2 API5-202ENST00000420461 2009 ntTSL 2 BASIC22.83■■□□□ 1.24
CDC42BPBQ9Y5S2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC22.83■■□□□ 1.24
CDC42BPBQ9Y5S2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CDC42BPBQ9Y5S2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
CDC42BPBQ9Y5S2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms