Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 SPDYE7P-202ENST00000420373 878 ntBASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 AC026150.2-201ENST00000564693 1156 ntBASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 MIR4313-201ENST00000580760 101 ntBASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 AC127383.1-201ENST00000444697 1800 ntBASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
POLR1DQ9Y2S0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 AZGP1P1-201ENST00000411909 902 ntBASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 CNN2P11-201ENST00000429351 262 ntBASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 SPDYE14P-201ENST00000442619 822 ntBASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 EEF1DP4-201ENST00000446006 880 ntBASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 AC093520.2-201ENST00000561830 333 ntBASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
POLR1DQ9Y2S0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 AL035456.1-201ENST00000456064 1369 ntBASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 AL513477.1-201ENST00000602865 2407 ntBASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
POLR1DQ9Y2S0 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms