Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 KRT8P37-201ENST00000451609 1420 ntBASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 TPRX2P-201ENST00000535362 881 ntBASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 AC004461.2-201ENST00000629517 803 ntBASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 KRT8P12-202ENST00000472924 1397 ntBASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
FNDC3AQ9Y2H6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 TTTY23B-201ENST00000442790 549 ntBASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 MYCLP2-201ENST00000449268 967 ntBASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FNDC3AQ9Y2H6 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 AP005117.1-202ENST00000581724 1908 ntBASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 AC092127.1-201ENST00000567093 3455 ntBASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 AC022210.1-201ENST00000449856 793 ntBASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 AL589987.1-201ENST00000453380 819 ntBASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 AC023310.3-201ENST00000557027 670 ntBASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 AC100756.1-201ENST00000562736 682 ntBASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 AC138749.3-201ENST00000567691 622 ntBASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 AC116165.1-201ENST00000611806 668 ntBASIC15.96■□□□□ 0.15
FNDC3AQ9Y2H6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms