Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 POM121L8P-201ENST00000417732 1281 ntBASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 POM121L9P-203ENST00000441984 1285 ntBASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 IGLV3-15-201ENST00000518356 244 ntBASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 AL603764.1-201ENST00000636452 321 ntBASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 KRT8P14-201ENST00000414254 1442 ntBASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 PUDPP3-201ENST00000445368 636 ntBASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 RPL7P35-201ENST00000446943 740 ntBASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 PPOX-204ENST00000462866 473 ntTSL 5 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 AC106820.3-201ENST00000561653 397 ntBASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 AL031713.1-201ENST00000564813 661 ntBASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 GMFG-209ENST00000600322 622 ntTSL 5 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZC3H4Q9UPT8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 AC004899.1-201ENST00000424687 1714 ntBASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 AC025271.4-201ENST00000621477 1726 ntBASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 SERF2-206ENST00000409291 807 ntTSL 3 BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 AL391280.1-201ENST00000506969 1062 ntBASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 YRDCP1-201ENST00000621419 643 ntBASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZC3H4Q9UPT8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms