Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 AC092127.1-201ENST00000567093 3455 ntBASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 CD74-212ENST00000524315 584 ntTSL 5 BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN3Q9UPQ7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 AC018892.3-201ENST00000623986 2499 ntBASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 TNRC18P2-201ENST00000417666 2714 ntBASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 AC093525.8-201ENST00000624099 1342 ntBASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 ENPP7P5-201ENST00000541031 1031 ntBASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 AC103810.3-201ENST00000583567 96 ntBASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 AP002414.2-201ENST00000591780 3365 ntBASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN3Q9UPQ7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 AC105250.1-201ENST00000509378 2057 ntBASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 TMBIM7P-203ENST00000641617 1718 ntBASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 AC009090.5-201ENST00000624886 2285 ntBASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 MIR5189-201ENST00000577370 114 ntBASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 API5-202ENST00000420461 2009 ntTSL 2 BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PDZRN3Q9UPQ7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
PDZRN3Q9UPQ7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms