Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 LINC00528-201ENST00000600723 2160 ntBASIC13.8□□□□□ -0.2
DUX4Q9UBX2 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
DUX4Q9UBX2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 AC131212.3-201ENST00000624087 4219 ntBASIC13.79□□□□□ -0.2
DUX4Q9UBX2 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 PCGF3-213ENST00000620529 1899 ntBASIC13.79□□□□□ -0.2
DUX4Q9UBX2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 MKNK2P1-201ENST00000437526 628 ntBASIC13.79□□□□□ -0.2
DUX4Q9UBX2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 YBX1P5-201ENST00000509441 847 ntBASIC13.79□□□□□ -0.2
DUX4Q9UBX2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 RARRES2P8-201ENST00000566335 367 ntBASIC13.79□□□□□ -0.2
DUX4Q9UBX2 AL138918.1-201ENST00000568306 659 ntBASIC13.79□□□□□ -0.2
DUX4Q9UBX2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 WASH6P-202ENST00000359512 1437 ntBASIC13.79□□□□□ -0.2
DUX4Q9UBX2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.79□□□□□ -0.2
DUX4Q9UBX2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 TFAMP1-201ENST00000412727 736 ntBASIC13.78□□□□□ -0.2
DUX4Q9UBX2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.78□□□□□ -0.2
DUX4Q9UBX2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms