Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VTA1Q9NP79 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.25■□□□□ 0.35
VTA1Q9NP79 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VTA1Q9NP79 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VTA1Q9NP79 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VTA1Q9NP79 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VTA1Q9NP79 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VTA1Q9NP79 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VTA1Q9NP79 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VTA1Q9NP79 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
VTA1Q9NP79 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.25■□□□□ 0.35
VTA1Q9NP79 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VTA1Q9NP79 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 AC046158.3-201ENST00000624947 2558 ntBASIC17.24■□□□□ 0.35
VTA1Q9NP79 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 POM121L8P-201ENST00000417732 1281 ntBASIC17.24■□□□□ 0.35
VTA1Q9NP79 POM121L10P-201ENST00000436994 1285 ntBASIC17.24■□□□□ 0.35
VTA1Q9NP79 POM121L9P-203ENST00000441984 1285 ntBASIC17.24■□□□□ 0.35
VTA1Q9NP79 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 COX5BP1-201ENST00000507622 393 ntBASIC17.24■□□□□ 0.35
VTA1Q9NP79 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.24■□□□□ 0.35
VTA1Q9NP79 AC244157.2-201ENST00000616239 1006 ntBASIC17.24■□□□□ 0.35
VTA1Q9NP79 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 AC138028.6-201ENST00000616106 1482 ntBASIC17.24■□□□□ 0.35
VTA1Q9NP79 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VTA1Q9NP79 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VTA1Q9NP79 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VTA1Q9NP79 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.23■□□□□ 0.35
VTA1Q9NP79 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VTA1Q9NP79 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
VTA1Q9NP79 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VTA1Q9NP79 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
VTA1Q9NP79 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
VTA1Q9NP79 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 AC104457.1-201ENST00000401024 814 ntBASIC17.23■□□□□ 0.35
VTA1Q9NP79 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.23■□□□□ 0.35
VTA1Q9NP79 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 AKR7A2P1-201ENST00000460134 915 ntBASIC17.23■□□□□ 0.35
VTA1Q9NP79 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.23■□□□□ 0.35
VTA1Q9NP79 SCARNA20.5-201ENST00000516991 142 ntBASIC17.23■□□□□ 0.35
VTA1Q9NP79 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.23■□□□□ 0.35
VTA1Q9NP79 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 RN7SL713P-201ENST00000582127 302 ntBASIC17.23■□□□□ 0.35
VTA1Q9NP79 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 PCDH8P1-201ENST00000428983 2773 ntBASIC17.23■□□□□ 0.35
VTA1Q9NP79 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.23■□□□□ 0.35
VTA1Q9NP79 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VTA1Q9NP79 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms