Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.36□□□□□ -0.27
GCM1Q9NP62 SPDYE18-201ENST00000510091 1050 ntBASIC13.36□□□□□ -0.27
GCM1Q9NP62 AC092337.1-201ENST00000568699 1129 ntBASIC13.36□□□□□ -0.27
GCM1Q9NP62 SRD5A3P1-201ENST00000603021 949 ntBASIC13.36□□□□□ -0.27
GCM1Q9NP62 LINC01115-203ENST00000606068 577 ntBASIC13.36□□□□□ -0.27
GCM1Q9NP62 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.36□□□□□ -0.27
GCM1Q9NP62 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.36□□□□□ -0.27
GCM1Q9NP62 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
GCM1Q9NP62 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.36□□□□□ -0.27
GCM1Q9NP62 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
GCM1Q9NP62 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.36□□□□□ -0.27
GCM1Q9NP62 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.36□□□□□ -0.27
GCM1Q9NP62 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GCM1Q9NP62 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 AC007950.2-201ENST00000615045 2347 ntBASIC13.35□□□□□ -0.27
GCM1Q9NP62 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 RPL13P2-201ENST00000440687 659 ntBASIC13.35□□□□□ -0.27
GCM1Q9NP62 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 MIR3197-201ENST00000582241 73 ntBASIC13.35□□□□□ -0.27
GCM1Q9NP62 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
GCM1Q9NP62 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
GCM1Q9NP62 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GCM1Q9NP62 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.34□□□□□ -0.27
GCM1Q9NP62 SPTLC1P1-201ENST00000447199 261 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms