Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 MIR1908-201ENST00000410394 80 ntBASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 RPL7P3-201ENST00000441388 714 ntBASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 AC009486.1-201ENST00000569860 813 ntBASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 CLUHP6-201ENST00000580789 941 ntBASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 AC126177.1-201ENST00000547829 2218 ntBASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TM9SF3Q9HD45 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.58■□□□□ 0.09
TM9SF3Q9HD45 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.58■□□□□ 0.09
TM9SF3Q9HD45 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TM9SF3Q9HD45 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TM9SF3Q9HD45 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
TM9SF3Q9HD45 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TM9SF3Q9HD45 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.58■□□□□ 0.09
TM9SF3Q9HD45 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TM9SF3Q9HD45 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TM9SF3Q9HD45 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TM9SF3Q9HD45 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TM9SF3Q9HD45 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 AC006449.6-201ENST00000612330 2296 ntBASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 FO681548.1-201ENST00000455617 1132 ntBASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 AC007551.1-201ENST00000457394 519 ntBASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.58■□□□□ 0.08
TM9SF3Q9HD45 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.57■□□□□ 0.08
TM9SF3Q9HD45 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms