Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 LINC01230-201ENST00000625222 3017 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 CYP4F24P-201ENST00000586049 1580 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AL607033.1-201ENST00000623900 1599 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 DCUN1D2-AS-201ENST00000414992 330 ntTSL 3 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AL031284.1-201ENST00000419297 478 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 GXYLT1P1-201ENST00000446657 490 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 MTCYBP11-201ENST00000447254 1109 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 KRT18P2-201ENST00000447938 1258 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AC079781.3-201ENST00000449110 356 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AL359839.1-201ENST00000451975 1160 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 KRT19P2-202ENST00000557173 1012 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AC018845.2-201ENST00000568326 409 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AP002472.1-201ENST00000577490 586 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AP001020.1-201ENST00000579595 464 ntTSL 3 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AC018754.1-201ENST00000607486 925 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AL161645.1-201ENST00000622716 1255 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AC027601.5-201ENST00000624065 2482 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 MTHFR-210ENST00000641407 2387 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 AL022393.1-201ENST00000625142 1677 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 FER1L4-210ENST00000615531 5998 ntBASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
KRTAP3-1Q9BYR8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
KRTAP3-1Q9BYR8 WASH3P-207ENST00000560956 1394 ntBASIC7.97□□□□□ -1.13
KRTAP3-1Q9BYR8 BX640514.1-201ENST00000583223 1918 ntBASIC7.97□□□□□ -1.13
KRTAP3-1Q9BYR8 FO538757.1-201ENST00000623083 1397 ntBASIC7.97□□□□□ -1.13
KRTAP3-1Q9BYR8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC7.97□□□□□ -1.13
KRTAP3-1Q9BYR8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
KRTAP3-1Q9BYR8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC7.97□□□□□ -1.13
KRTAP3-1Q9BYR8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
KRTAP3-1Q9BYR8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms