Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SMOQ99835 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.22■□□□□ 0.19
SMOQ99835 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
SMOQ99835 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.22■□□□□ 0.19
SMOQ99835 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.22■□□□□ 0.19
SMOQ99835 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.22■□□□□ 0.19
SMOQ99835 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
SMOQ99835 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SMOQ99835 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.22■□□□□ 0.19
SMOQ99835 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.22■□□□□ 0.19
SMOQ99835 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.22■□□□□ 0.19
SMOQ99835 CROCCP4-201ENST00000457096 498 ntBASIC16.22■□□□□ 0.19
SMOQ99835 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.22■□□□□ 0.19
SMOQ99835 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.22■□□□□ 0.19
SMOQ99835 HILS1-202ENST00000545329 423 ntBASIC16.22■□□□□ 0.19
SMOQ99835 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.22■□□□□ 0.19
SMOQ99835 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SMOQ99835 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.22■□□□□ 0.19
SMOQ99835 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.22■□□□□ 0.19
SMOQ99835 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SMOQ99835 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.22■□□□□ 0.19
SMOQ99835 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.22■□□□□ 0.19
SMOQ99835 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.22■□□□□ 0.19
SMOQ99835 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMOQ99835 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SMOQ99835 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SMOQ99835 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SMOQ99835 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SMOQ99835 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SMOQ99835 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.21■□□□□ 0.19
SMOQ99835 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.21■□□□□ 0.19
SMOQ99835 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.21■□□□□ 0.19
SMOQ99835 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.21■□□□□ 0.19
SMOQ99835 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SMOQ99835 PPT1-215ENST00000641471 2368 ntBASIC16.21■□□□□ 0.19
SMOQ99835 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SMOQ99835 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.21■□□□□ 0.19
SMOQ99835 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SMOQ99835 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 AL158070.2-201ENST00000623713 1621 ntBASIC16.21■□□□□ 0.19
SMOQ99835 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 OR8S1-201ENST00000310194 1080 ntBASIC16.21■□□□□ 0.19
SMOQ99835 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.21■□□□□ 0.19
SMOQ99835 RNU1-114P-201ENST00000365297 166 ntBASIC16.21■□□□□ 0.19
SMOQ99835 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 GK-202ENST00000378941 458 ntTSL 3 BASIC16.21■□□□□ 0.19
SMOQ99835 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.21■□□□□ 0.19
SMOQ99835 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.21■□□□□ 0.19
SMOQ99835 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.21■□□□□ 0.19
SMOQ99835 BCRP2-202ENST00000447763 634 ntBASIC16.21■□□□□ 0.19
SMOQ99835 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.21■□□□□ 0.19
SMOQ99835 AC106760.1-201ENST00000508690 800 ntBASIC16.21■□□□□ 0.19
SMOQ99835 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.21■□□□□ 0.19
SMOQ99835 BCRP6-201ENST00000510112 632 ntBASIC16.21■□□□□ 0.19
SMOQ99835 BCRP7-201ENST00000511549 544 ntBASIC16.21■□□□□ 0.19
SMOQ99835 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SMOQ99835 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.21■□□□□ 0.19
SMOQ99835 AP005019.2-201ENST00000615104 511 ntBASIC16.21■□□□□ 0.19
SMOQ99835 PRSS30P-206ENST00000641773 873 ntBASIC16.21■□□□□ 0.19
SMOQ99835 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
SMOQ99835 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.21■□□□□ 0.19
SMOQ99835 KRT8P44-201ENST00000441609 1350 ntBASIC16.21■□□□□ 0.19
SMOQ99835 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.21■□□□□ 0.19
SMOQ99835 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SMOQ99835 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.21■□□□□ 0.18
SMOQ99835 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
SMOQ99835 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SMOQ99835 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SMOQ99835 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SMOQ99835 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
SMOQ99835 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms