Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.45■□□□□ 0.22
RAD9AQ99638 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.45■□□□□ 0.22
RAD9AQ99638 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 AL161670.2-201ENST00000557650 1227 ntBASIC16.45■□□□□ 0.22
RAD9AQ99638 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.45■□□□□ 0.22
RAD9AQ99638 AL133499.1-201ENST00000596207 608 ntBASIC16.45■□□□□ 0.22
RAD9AQ99638 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 AC026740.1-201ENST00000607068 791 ntBASIC16.45■□□□□ 0.22
RAD9AQ99638 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.45■□□□□ 0.22
RAD9AQ99638 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.45■□□□□ 0.22
RAD9AQ99638 AL603764.1-201ENST00000636452 321 ntBASIC16.45■□□□□ 0.22
RAD9AQ99638 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.45■□□□□ 0.22
RAD9AQ99638 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RAD9AQ99638 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.45■□□□□ 0.22
RAD9AQ99638 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RAD9AQ99638 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.45■□□□□ 0.22
RAD9AQ99638 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.45■□□□□ 0.22
RAD9AQ99638 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAD9AQ99638 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAD9AQ99638 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAD9AQ99638 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.44■□□□□ 0.22
RAD9AQ99638 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAD9AQ99638 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RAD9AQ99638 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAD9AQ99638 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAD9AQ99638 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAD9AQ99638 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.44■□□□□ 0.22
RAD9AQ99638 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RAD9AQ99638 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RAD9AQ99638 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.44■□□□□ 0.22
RAD9AQ99638 AL136309.1-201ENST00000403917 691 ntBASIC16.44■□□□□ 0.22
RAD9AQ99638 RPL17P11-201ENST00000417593 544 ntBASIC16.44■□□□□ 0.22
RAD9AQ99638 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.44■□□□□ 0.22
RAD9AQ99638 AL596276.2-201ENST00000447525 331 ntBASIC16.44■□□□□ 0.22
RAD9AQ99638 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.44■□□□□ 0.22
RAD9AQ99638 AC012618.1-201ENST00000461223 412 ntBASIC16.44■□□□□ 0.22
RAD9AQ99638 AC106794.1-201ENST00000506935 792 ntBASIC16.44■□□□□ 0.22
RAD9AQ99638 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.44■□□□□ 0.22
RAD9AQ99638 AP003171.2-201ENST00000528208 925 ntBASIC16.44■□□□□ 0.22
RAD9AQ99638 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.44■□□□□ 0.22
RAD9AQ99638 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAD9AQ99638 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.44■□□□□ 0.22
RAD9AQ99638 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAD9AQ99638 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAD9AQ99638 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAD9AQ99638 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAD9AQ99638 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RAD9AQ99638 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RAD9AQ99638 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAD9AQ99638 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAD9AQ99638 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAD9AQ99638 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAD9AQ99638 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RAD9AQ99638 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAD9AQ99638 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAD9AQ99638 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAD9AQ99638 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAD9AQ99638 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAD9AQ99638 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.43■□□□□ 0.22
RAD9AQ99638 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAD9AQ99638 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
RAD9AQ99638 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.43■□□□□ 0.22
RAD9AQ99638 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.43■□□□□ 0.22
RAD9AQ99638 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RAD9AQ99638 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAD9AQ99638 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAD9AQ99638 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.43■□□□□ 0.22
RAD9AQ99638 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAD9AQ99638 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAD9AQ99638 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.43■□□□□ 0.22
RAD9AQ99638 AC007274.2-201ENST00000421675 662 ntBASIC16.43■□□□□ 0.22
RAD9AQ99638 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.43■□□□□ 0.22
RAD9AQ99638 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAD9AQ99638 AC008267.1-201ENST00000474858 1069 ntBASIC16.43■□□□□ 0.22
RAD9AQ99638 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.43■□□□□ 0.22
RAD9AQ99638 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAD9AQ99638 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.43■□□□□ 0.22
RAD9AQ99638 AC106820.3-201ENST00000561653 397 ntBASIC16.43■□□□□ 0.22
RAD9AQ99638 AC013355.1-201ENST00000562625 723 ntBASIC16.43■□□□□ 0.22
RAD9AQ99638 RN7SL163P-201ENST00000583100 276 ntBASIC16.43■□□□□ 0.22
RAD9AQ99638 BNIP3P13-201ENST00000599968 566 ntBASIC16.43■□□□□ 0.22
RAD9AQ99638 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.43■□□□□ 0.22
RAD9AQ99638 AC004923.1-202ENST00000642106 209 ntBASIC16.43■□□□□ 0.22
RAD9AQ99638 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
RAD9AQ99638 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RAD9AQ99638 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAD9AQ99638 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAD9AQ99638 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAD9AQ99638 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAD9AQ99638 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms