Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 AC136604.1-201ENST00000418535 575 ntBASIC12.69□□□□□ -0.38
ZNF48Q96MX3 AC134915.1-201ENST00000426461 574 ntBASIC12.69□□□□□ -0.38
ZNF48Q96MX3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 BCRP2-202ENST00000447763 634 ntBASIC12.69□□□□□ -0.38
ZNF48Q96MX3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 BCRP6-201ENST00000510112 632 ntBASIC12.69□□□□□ -0.38
ZNF48Q96MX3 BCRP7-201ENST00000511549 544 ntBASIC12.69□□□□□ -0.38
ZNF48Q96MX3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 AL049840.4-201ENST00000602422 811 ntBASIC12.69□□□□□ -0.38
ZNF48Q96MX3 AL450472.2-201ENST00000603663 1156 ntBASIC12.69□□□□□ -0.38
ZNF48Q96MX3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
ZNF48Q96MX3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.68□□□□□ -0.38
ZNF48Q96MX3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 FAM86MP-201ENST00000340703 885 ntBASIC12.68□□□□□ -0.38
ZNF48Q96MX3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 VDAC1P7-201ENST00000462417 847 ntBASIC12.68□□□□□ -0.38
ZNF48Q96MX3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 AC097359.3-201ENST00000603982 1210 ntBASIC12.68□□□□□ -0.38
ZNF48Q96MX3 AL022328.1-201ENST00000610050 478 ntBASIC12.68□□□□□ -0.38
ZNF48Q96MX3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 AC011477.6-201ENST00000604980 1927 ntBASIC12.68□□□□□ -0.38
ZNF48Q96MX3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 AL607033.1-201ENST00000623900 1599 ntBASIC12.68□□□□□ -0.38
ZNF48Q96MX3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZNF48Q96MX3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms