Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
USP13Q92995 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
USP13Q92995 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.33■□□□□ 0.21
USP13Q92995 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
USP13Q92995 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.33■□□□□ 0.21
USP13Q92995 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
USP13Q92995 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
USP13Q92995 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
USP13Q92995 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.33■□□□□ 0.21
USP13Q92995 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
USP13Q92995 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
USP13Q92995 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 AP002414.2-201ENST00000591780 3365 ntBASIC16.33■□□□□ 0.2
USP13Q92995 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.33■□□□□ 0.2
USP13Q92995 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.33■□□□□ 0.2
USP13Q92995 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
USP13Q92995 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.33■□□□□ 0.2
USP13Q92995 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 BOLA2P3-201ENST00000404566 256 ntBASIC16.33■□□□□ 0.2
USP13Q92995 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.33■□□□□ 0.2
USP13Q92995 KRT43P-201ENST00000434019 910 ntBASIC16.33■□□□□ 0.2
USP13Q92995 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.33■□□□□ 0.2
USP13Q92995 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.33■□□□□ 0.2
USP13Q92995 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.33■□□□□ 0.2
USP13Q92995 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.33■□□□□ 0.2
USP13Q92995 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.33■□□□□ 0.2
USP13Q92995 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.33■□□□□ 0.2
USP13Q92995 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.33■□□□□ 0.2
USP13Q92995 VDAC1P7-201ENST00000462417 847 ntBASIC16.33■□□□□ 0.2
USP13Q92995 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
USP13Q92995 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.33■□□□□ 0.2
USP13Q92995 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.33■□□□□ 0.2
USP13Q92995 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
USP13Q92995 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
USP13Q92995 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.33■□□□□ 0.2
USP13Q92995 AC133552.6-201ENST00000613406 534 ntBASIC16.33■□□□□ 0.2
USP13Q92995 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.33■□□□□ 0.2
USP13Q92995 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.33■□□□□ 0.2
USP13Q92995 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.33■□□□□ 0.2
USP13Q92995 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.33■□□□□ 0.2
USP13Q92995 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
USP13Q92995 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.33■□□□□ 0.2
USP13Q92995 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.33■□□□□ 0.2
USP13Q92995 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.33■□□□□ 0.2
USP13Q92995 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
USP13Q92995 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
USP13Q92995 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
USP13Q92995 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.32■□□□□ 0.2
USP13Q92995 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.32■□□□□ 0.2
USP13Q92995 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.32■□□□□ 0.2
USP13Q92995 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
USP13Q92995 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
USP13Q92995 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.32■□□□□ 0.2
USP13Q92995 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.32■□□□□ 0.2
USP13Q92995 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.32■□□□□ 0.2
USP13Q92995 RPL13AP25-201ENST00000484130 612 ntBASIC16.32■□□□□ 0.2
USP13Q92995 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
USP13Q92995 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.32■□□□□ 0.2
USP13Q92995 AC104989.1-201ENST00000519711 778 ntBASIC16.32■□□□□ 0.2
USP13Q92995 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.32■□□□□ 0.2
USP13Q92995 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.32■□□□□ 0.2
USP13Q92995 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.32■□□□□ 0.2
USP13Q92995 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
USP13Q92995 ENPP7P5-201ENST00000541031 1031 ntBASIC16.32■□□□□ 0.2
USP13Q92995 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.32■□□□□ 0.2
USP13Q92995 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.32■□□□□ 0.2
USP13Q92995 AC120045.2-201ENST00000567334 178 ntBASIC16.32■□□□□ 0.2
USP13Q92995 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.32■□□□□ 0.2
USP13Q92995 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms