Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.6□□□□□ -0.07
NUP43Q8NFH3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 MST1L-201ENST00000442552 2185 ntBASIC14.59□□□□□ -0.07
NUP43Q8NFH3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 AL133267.1-201ENST00000398220 340 ntBASIC14.59□□□□□ -0.07
NUP43Q8NFH3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 AL844908.2-201ENST00000609461 460 ntBASIC14.59□□□□□ -0.07
NUP43Q8NFH3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NUP43Q8NFH3 TCAF2P1-201ENST00000291129 2421 ntBASIC14.58□□□□□ -0.07
NUP43Q8NFH3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NUP43Q8NFH3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NUP43Q8NFH3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NUP43Q8NFH3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
NUP43Q8NFH3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
NUP43Q8NFH3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.07
NUP43Q8NFH3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NUP43Q8NFH3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 AC241585.1-201ENST00000433527 519 ntBASIC14.58□□□□□ -0.08
NUP43Q8NFH3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 TNRC18P2-201ENST00000417666 2714 ntBASIC14.58□□□□□ -0.08
NUP43Q8NFH3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP43Q8NFH3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms