Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 Z98259.2-201ENST00000641583 609 ntBASIC12.78□□□□□ -0.36
CSMD2Q7Z408 AC144522.1-201ENST00000625111 1658 ntBASIC12.78□□□□□ -0.36
CSMD2Q7Z408 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.78□□□□□ -0.36
CSMD2Q7Z408 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 AC004522.1-201ENST00000419978 654 ntBASIC12.78□□□□□ -0.36
CSMD2Q7Z408 AL627422.1-201ENST00000434104 580 ntBASIC12.78□□□□□ -0.36
CSMD2Q7Z408 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 CR383656.3-201ENST00000551315 183 ntBASIC12.78□□□□□ -0.36
CSMD2Q7Z408 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 AC018695.6-201ENST00000614011 534 ntBASIC12.78□□□□□ -0.36
CSMD2Q7Z408 AL136295.7-201ENST00000619226 1200 ntBASIC12.78□□□□□ -0.36
CSMD2Q7Z408 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 CICP11-201ENST00000434745 2827 ntBASIC12.78□□□□□ -0.36
CSMD2Q7Z408 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.78□□□□□ -0.36
CSMD2Q7Z408 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSMD2Q7Z408 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.77□□□□□ -0.36
CSMD2Q7Z408 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CSMD2Q7Z408 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CSMD2Q7Z408 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CSMD2Q7Z408 AP000593.2-201ENST00000542775 1433 ntBASIC12.77□□□□□ -0.36
CSMD2Q7Z408 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSMD2Q7Z408 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.77□□□□□ -0.36
CSMD2Q7Z408 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CSMD2Q7Z408 AC239868.1-201ENST00000369385 493 ntBASIC12.77□□□□□ -0.36
CSMD2Q7Z408 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC12.77□□□□□ -0.36
CSMD2Q7Z408 AC012073.1-201ENST00000606114 1108 ntBASIC12.77□□□□□ -0.36
CSMD2Q7Z408 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.77□□□□□ -0.36
CSMD2Q7Z408 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 KRT17P4-201ENST00000429445 819 ntBASIC12.77□□□□□ -0.37
CSMD2Q7Z408 PSMD4P1-201ENST00000433951 1109 ntBASIC12.77□□□□□ -0.37
CSMD2Q7Z408 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 AL627230.2-201ENST00000613254 655 ntBASIC12.77□□□□□ -0.37
CSMD2Q7Z408 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.77□□□□□ -0.37
CSMD2Q7Z408 PRAL-201ENST00000624952 3286 ntBASIC12.77□□□□□ -0.37
CSMD2Q7Z408 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC12.76□□□□□ -0.37
CSMD2Q7Z408 VDAC1P1-201ENST00000439229 848 ntBASIC12.76□□□□□ -0.37
CSMD2Q7Z408 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD2Q7Z408 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD2Q7Z408 LINC01165-201ENST00000445190 1623 ntBASIC12.76□□□□□ -0.37
CSMD2Q7Z408 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CSMD2Q7Z408 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms