Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 AL589739.1-201ENST00000607720 493 ntBASIC14.23□□□□□ -0.13
NIPAL3Q6P499 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 CETN4P-206ENST00000642099 2168 ntBASIC14.23□□□□□ -0.13
NIPAL3Q6P499 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 KRT8P37-201ENST00000451609 1420 ntBASIC14.23□□□□□ -0.13
NIPAL3Q6P499 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.23□□□□□ -0.13
NIPAL3Q6P499 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 AC023024.2-201ENST00000623561 1993 ntBASIC14.22□□□□□ -0.13
NIPAL3Q6P499 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 AC023908.3-201ENST00000564211 3047 ntBASIC14.22□□□□□ -0.13
NIPAL3Q6P499 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 AC107890.1-201ENST00000422478 521 ntBASIC14.22□□□□□ -0.13
NIPAL3Q6P499 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 AL133215.2-201ENST00000609242 977 ntBASIC14.22□□□□□ -0.13
NIPAL3Q6P499 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NIPAL3Q6P499 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.21□□□□□ -0.13
NIPAL3Q6P499 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.21□□□□□ -0.13
NIPAL3Q6P499 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 AC069120.2-201ENST00000524091 540 ntBASIC14.21□□□□□ -0.13
NIPAL3Q6P499 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.21□□□□□ -0.13
NIPAL3Q6P499 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms