Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
MRPL54Q6P161 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
MRPL54Q6P161 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 BAALC-201ENST00000297574 801 ntTSL 3 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 SLC25A6P2-201ENST00000497974 877 ntBASIC11.82□□□□□ -0.52
MRPL54Q6P161 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 AL139424.1-201ENST00000607572 797 ntBASIC11.82□□□□□ -0.52
MRPL54Q6P161 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 AL359881.3-201ENST00000602640 1721 ntBASIC11.82□□□□□ -0.52
MRPL54Q6P161 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
MRPL54Q6P161 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
MRPL54Q6P161 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
MRPL54Q6P161 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL54Q6P161 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL54Q6P161 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
MRPL54Q6P161 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
MRPL54Q6P161 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
MRPL54Q6P161 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms