Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.08□□□□□ -0.15
RTL6Q6ICC9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
RTL6Q6ICC9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
RTL6Q6ICC9 KRT8P22-201ENST00000562317 1415 ntBASIC14.08□□□□□ -0.15
RTL6Q6ICC9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RTL6Q6ICC9 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 AC022532.1-201ENST00000624563 1728 ntBASIC14.08□□□□□ -0.16
RTL6Q6ICC9 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 AL359711.2-201ENST00000563105 872 ntBASIC14.08□□□□□ -0.16
RTL6Q6ICC9 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 AC097359.3-201ENST00000603982 1210 ntBASIC14.08□□□□□ -0.16
RTL6Q6ICC9 Six3os1_5.1-201ENST00000611000 271 ntBASIC14.08□□□□□ -0.16
RTL6Q6ICC9 MIR6775-201ENST00000617557 69 ntBASIC14.08□□□□□ -0.16
RTL6Q6ICC9 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.08□□□□□ -0.16
RTL6Q6ICC9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 PAUPAR-201ENST00000630360 2965 ntBASIC14.07□□□□□ -0.16
RTL6Q6ICC9 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.07□□□□□ -0.16
RTL6Q6ICC9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 SLED1-202ENST00000512051 380 ntBASIC14.07□□□□□ -0.16
RTL6Q6ICC9 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 BTNL10-201ENST00000595971 695 ntBASIC14.07□□□□□ -0.16
RTL6Q6ICC9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 AC133539.2-201ENST00000604757 467 ntBASIC14.07□□□□□ -0.16
RTL6Q6ICC9 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RTL6Q6ICC9 CU634019.7-201ENST00000624153 1185 ntBASIC14.07□□□□□ -0.16
RTL6Q6ICC9 FP236241.2-201ENST00000624906 1185 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms