Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 AC016694.1-201ENST00000434179 700 ntBASIC20.98■□□□□ 0.95
CGNL1Q0VF96 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 KRT90P-201ENST00000549264 1064 ntBASIC20.98■□□□□ 0.95
CGNL1Q0VF96 SAMD11P1-201ENST00000571429 661 ntBASIC20.98■□□□□ 0.95
CGNL1Q0VF96 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CGNL1Q0VF96 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 AC025279.2-201ENST00000569730 653 ntBASIC20.97■□□□□ 0.95
CGNL1Q0VF96 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 AC244669.2-201ENST00000612320 853 ntBASIC20.97■□□□□ 0.95
CGNL1Q0VF96 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CGNL1Q0VF96 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 AL158070.2-201ENST00000623713 1621 ntBASIC20.96■□□□□ 0.95
CGNL1Q0VF96 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 AC020658.6-201ENST00000623564 1870 ntBASIC20.96■□□□□ 0.95
CGNL1Q0VF96 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 ZBTB12BP-201ENST00000314232 1122 ntBASIC20.96■□□□□ 0.95
CGNL1Q0VF96 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 NME2-201ENST00000393183 568 ntTSL 2 BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 B9D1-203ENST00000395615 805 ntTSL 3 BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 AC114812.1-204ENST00000449669 728 ntBASIC20.96■□□□□ 0.95
CGNL1Q0VF96 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 FAM8A2P-201ENST00000528813 1142 ntBASIC20.96■□□□□ 0.95
CGNL1Q0VF96 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 AL138709.1-201ENST00000614840 1693 ntBASIC20.96■□□□□ 0.95
CGNL1Q0VF96 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
CGNL1Q0VF96 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CGNL1Q0VF96 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CGNL1Q0VF96 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CGNL1Q0VF96 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CGNL1Q0VF96 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.95■□□□□ 0.94
CGNL1Q0VF96 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC20.95■□□□□ 0.94
CGNL1Q0VF96 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC20.95■□□□□ 0.94
CGNL1Q0VF96 AC148477.4-201ENST00000613430 1793 ntBASIC20.95■□□□□ 0.94
CGNL1Q0VF96 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CGNL1Q0VF96 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CGNL1Q0VF96 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CGNL1Q0VF96 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CGNL1Q0VF96 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CGNL1Q0VF96 AL139094.1-201ENST00000405549 1188 ntBASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms