Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.41■□□□□ 0.22
UBE3AQ05086 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.41■□□□□ 0.22
UBE3AQ05086 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE3AQ05086 AC106886.4-201ENST00000623557 2502 ntBASIC16.41■□□□□ 0.22
UBE3AQ05086 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE3AQ05086 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
UBE3AQ05086 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
UBE3AQ05086 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
UBE3AQ05086 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
UBE3AQ05086 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
UBE3AQ05086 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
UBE3AQ05086 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE3AQ05086 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE3AQ05086 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE3AQ05086 AC124067.4-201ENST00000519691 2379 ntBASIC16.4■□□□□ 0.22
UBE3AQ05086 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE3AQ05086 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBE3AQ05086 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.4■□□□□ 0.22
UBE3AQ05086 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE3AQ05086 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE3AQ05086 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.4■□□□□ 0.22
UBE3AQ05086 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.4■□□□□ 0.22
UBE3AQ05086 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE3AQ05086 UPF3AP2-201ENST00000457924 1132 ntBASIC16.4■□□□□ 0.22
UBE3AQ05086 HIST2H2BC-201ENST00000498492 580 ntBASIC16.4■□□□□ 0.22
UBE3AQ05086 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
UBE3AQ05086 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
UBE3AQ05086 AC079328.1-201ENST00000560358 952 ntBASIC16.4■□□□□ 0.22
UBE3AQ05086 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.4■□□□□ 0.22
UBE3AQ05086 NDUFV2P1-201ENST00000596415 907 ntBASIC16.4■□□□□ 0.22
UBE3AQ05086 AC025181.2-201ENST00000606994 802 ntBASIC16.4■□□□□ 0.22
UBE3AQ05086 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE3AQ05086 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE3AQ05086 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE3AQ05086 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE3AQ05086 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
UBE3AQ05086 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE3AQ05086 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.4■□□□□ 0.22
UBE3AQ05086 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
UBE3AQ05086 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE3AQ05086 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE3AQ05086 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBE3AQ05086 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
UBE3AQ05086 AC018735.1-201ENST00000437208 1502 ntBASIC16.4■□□□□ 0.22
UBE3AQ05086 LRRC59-203ENST00000576448 1531 ntBASIC16.4■□□□□ 0.22
UBE3AQ05086 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
UBE3AQ05086 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
UBE3AQ05086 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.39■□□□□ 0.22
UBE3AQ05086 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
UBE3AQ05086 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
UBE3AQ05086 AL023775.1-201ENST00000454907 1746 ntBASIC16.39■□□□□ 0.21
UBE3AQ05086 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE3AQ05086 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE3AQ05086 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE3AQ05086 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE3AQ05086 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE3AQ05086 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE3AQ05086 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE3AQ05086 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
UBE3AQ05086 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE3AQ05086 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
UBE3AQ05086 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
UBE3AQ05086 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE3AQ05086 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE3AQ05086 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
UBE3AQ05086 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE3AQ05086 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.39■□□□□ 0.21
UBE3AQ05086 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE3AQ05086 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.39■□□□□ 0.21
UBE3AQ05086 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.39■□□□□ 0.21
UBE3AQ05086 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE3AQ05086 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE3AQ05086 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.39■□□□□ 0.21
UBE3AQ05086 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
UBE3AQ05086 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE3AQ05086 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE3AQ05086 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.39■□□□□ 0.21
UBE3AQ05086 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
UBE3AQ05086 AC138627.1-207ENST00000641560 1006 ntBASIC16.39■□□□□ 0.21
UBE3AQ05086 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE3AQ05086 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE3AQ05086 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE3AQ05086 AC080080.1-201ENST00000625121 2420 ntBASIC16.39■□□□□ 0.21
UBE3AQ05086 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE3AQ05086 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE3AQ05086 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE3AQ05086 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.39■□□□□ 0.21
UBE3AQ05086 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE3AQ05086 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.39■□□□□ 0.21
UBE3AQ05086 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE3AQ05086 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBE3AQ05086 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
UBE3AQ05086 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
UBE3AQ05086 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE3AQ05086 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBE3AQ05086 AC148477.4-201ENST00000613430 1793 ntBASIC16.38■□□□□ 0.21
UBE3AQ05086 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.38■□□□□ 0.21
UBE3AQ05086 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBE3AQ05086 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBE3AQ05086 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms