Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP1P78357 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.23■□□□□ 0.51
CNTNAP1P78357 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP1P78357 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CNTNAP1P78357 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.23■□□□□ 0.51
CNTNAP1P78357 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP1P78357 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP1P78357 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP1P78357 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP1P78357 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.23■□□□□ 0.51
CNTNAP1P78357 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP1P78357 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC18.23■□□□□ 0.51
CNTNAP1P78357 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.23■□□□□ 0.51
CNTNAP1P78357 AL139008.1-201ENST00000437894 228 ntBASIC18.23■□□□□ 0.51
CNTNAP1P78357 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.23■□□□□ 0.51
CNTNAP1P78357 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP1P78357 NCK2-206ENST00000522586 490 ntTSL 5 BASIC18.23■□□□□ 0.51
CNTNAP1P78357 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.23■□□□□ 0.51
CNTNAP1P78357 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP1P78357 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC18.23■□□□□ 0.51
CNTNAP1P78357 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP1P78357 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.23■□□□□ 0.51
CNTNAP1P78357 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC18.23■□□□□ 0.51
CNTNAP1P78357 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP1P78357 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CNTNAP1P78357 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNTNAP1P78357 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.23■□□□□ 0.51
CNTNAP1P78357 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.23■□□□□ 0.51
CNTNAP1P78357 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.23■□□□□ 0.51
CNTNAP1P78357 LRRC59-203ENST00000576448 1531 ntBASIC18.23■□□□□ 0.51
CNTNAP1P78357 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CNTNAP1P78357 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 AC112504.1-201ENST00000623415 1841 ntBASIC18.22■□□□□ 0.51
CNTNAP1P78357 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 AL354877.1-201ENST00000424412 413 ntBASIC18.22■□□□□ 0.51
CNTNAP1P78357 PDIA3P2-201ENST00000428073 158 ntBASIC18.22■□□□□ 0.51
CNTNAP1P78357 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 NEU3-205ENST00000531619 582 ntTSL 5 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 CDK7-214ENST00000626796 358 ntTSL 5 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 AC084364.1-201ENST00000551967 1556 ntBASIC18.22■□□□□ 0.51
CNTNAP1P78357 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CNTNAP1P78357 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CNTNAP1P78357 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP1P78357 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP1P78357 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP1P78357 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP1P78357 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP1P78357 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.21■□□□□ 0.51
CNTNAP1P78357 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC18.21■□□□□ 0.51
CNTNAP1P78357 POM121L8P-201ENST00000417732 1281 ntBASIC18.21■□□□□ 0.51
CNTNAP1P78357 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC18.21■□□□□ 0.51
CNTNAP1P78357 POM121L9P-203ENST00000441984 1285 ntBASIC18.21■□□□□ 0.51
CNTNAP1P78357 RPL18P13-201ENST00000478088 569 ntBASIC18.21■□□□□ 0.51
CNTNAP1P78357 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP1P78357 RTN3P1-201ENST00000536295 711 ntBASIC18.21■□□□□ 0.51
CNTNAP1P78357 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.21■□□□□ 0.51
CNTNAP1P78357 AL022344.2-201ENST00000568976 968 ntBASIC18.21■□□□□ 0.51
CNTNAP1P78357 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.21■□□□□ 0.51
CNTNAP1P78357 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CNTNAP1P78357 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.21■□□□□ 0.51
CNTNAP1P78357 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CNTNAP1P78357 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms