Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 RPS8P6-201ENST00000426177 609 ntBASIC14.3□□□□□ -0.12
CDC42P60953 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.3□□□□□ -0.12
CDC42P60953 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.3□□□□□ -0.12
CDC42P60953 HNRNPDP1-201ENST00000439535 754 ntBASIC14.3□□□□□ -0.12
CDC42P60953 FAM197Y8-203ENST00000450145 560 ntBASIC14.3□□□□□ -0.12
CDC42P60953 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.3□□□□□ -0.12
CDC42P60953 AC018712.1-201ENST00000455767 687 ntBASIC14.3□□□□□ -0.12
CDC42P60953 PHKG1P2-201ENST00000457537 863 ntBASIC14.3□□□□□ -0.12
CDC42P60953 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.3□□□□□ -0.12
CDC42P60953 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.3□□□□□ -0.12
CDC42P60953 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.3□□□□□ -0.12
CDC42P60953 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.3□□□□□ -0.12
CDC42P60953 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.3□□□□□ -0.12
CDC42P60953 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.3□□□□□ -0.12
CDC42P60953 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42P60953 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.3□□□□□ -0.12
CDC42P60953 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CDC42P60953 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.3□□□□□ -0.12
CDC42P60953 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42P60953 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42P60953 SPTSSB-204ENST00000617024 1292 ntBASIC14.3□□□□□ -0.12
CDC42P60953 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CDC42P60953 AC010507.1-201ENST00000633895 436 ntBASIC14.3□□□□□ -0.12
CDC42P60953 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.3□□□□□ -0.12
CDC42P60953 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42P60953 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42P60953 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42P60953 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CDC42P60953 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42P60953 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.3□□□□□ -0.12
CDC42P60953 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.3□□□□□ -0.12
CDC42P60953 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CDC42P60953 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42P60953 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42P60953 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42P60953 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42P60953 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CDC42P60953 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42P60953 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42P60953 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.3□□□□□ -0.12
CDC42P60953 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42P60953 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42P60953 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDC42P60953 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.29□□□□□ -0.12
CDC42P60953 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC42P60953 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.29□□□□□ -0.12
CDC42P60953 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC42P60953 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
CDC42P60953 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDC42P60953 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC42P60953 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CDC42P60953 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CDC42P60953 RHOQP3-201ENST00000437982 621 ntBASIC14.29□□□□□ -0.12
CDC42P60953 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.29□□□□□ -0.12
CDC42P60953 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC42P60953 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.29□□□□□ -0.12
CDC42P60953 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC42P60953 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.29□□□□□ -0.12
CDC42P60953 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.29□□□□□ -0.12
CDC42P60953 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.29□□□□□ -0.12
CDC42P60953 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.29□□□□□ -0.12
CDC42P60953 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.29□□□□□ -0.12
CDC42P60953 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.29□□□□□ -0.12
CDC42P60953 KRT8P37-201ENST00000451609 1420 ntBASIC14.29□□□□□ -0.12
CDC42P60953 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDC42P60953 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC42P60953 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDC42P60953 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CDC42P60953 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CDC42P60953 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC42P60953 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC42P60953 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.29□□□□□ -0.12
CDC42P60953 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CDC42P60953 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDC42P60953 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.28□□□□□ -0.12
CDC42P60953 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CDC42P60953 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms