Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.83□□□□□ -0.04
CLDN8P56748 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN8P56748 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.83□□□□□ -0.04
CLDN8P56748 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN8P56748 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CLDN8P56748 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CLDN8P56748 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN8P56748 PCDHA3-202ENST00000532566 4594 ntBASIC14.82□□□□□ -0.04
CLDN8P56748 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN8P56748 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
CLDN8P56748 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CLDN8P56748 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 AL133267.1-201ENST00000398220 340 ntBASIC14.82□□□□□ -0.04
CLDN8P56748 SPDYE7P-202ENST00000420373 878 ntBASIC14.82□□□□□ -0.04
CLDN8P56748 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CLDN8P56748 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 AC023141.5-201ENST00000458585 616 ntBASIC14.82□□□□□ -0.04
CLDN8P56748 AC112482.1-201ENST00000492080 688 ntBASIC14.82□□□□□ -0.04
CLDN8P56748 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN8P56748 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDN8P56748 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDN8P56748 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.82□□□□□ -0.04
CLDN8P56748 MIR3687-2-201ENST00000577708 61 ntBASIC14.82□□□□□ -0.04
CLDN8P56748 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN8P56748 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
CLDN8P56748 MIR3687-1-201ENST00000614492 61 ntBASIC14.82□□□□□ -0.04
CLDN8P56748 MIR6080-201ENST00000617359 66 ntBASIC14.82□□□□□ -0.04
CLDN8P56748 LINC00552-201ENST00000625151 2579 ntBASIC14.82□□□□□ -0.04
CLDN8P56748 AC023908.3-201ENST00000564211 3047 ntBASIC14.82□□□□□ -0.04
CLDN8P56748 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLDN8P56748 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN8P56748 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
CLDN8P56748 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN8P56748 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CLDN8P56748 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CLDN8P56748 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLDN8P56748 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
CLDN8P56748 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLDN8P56748 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN8P56748 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.82□□□□□ -0.04
CLDN8P56748 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN8P56748 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLDN8P56748 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.82□□□□□ -0.04
CLDN8P56748 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN8P56748 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN8P56748 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLDN8P56748 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN8P56748 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
CLDN8P56748 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN8P56748 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN8P56748 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN8P56748 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLDN8P56748 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN8P56748 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN8P56748 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLDN8P56748 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CLDN8P56748 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN8P56748 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN8P56748 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN8P56748 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN8P56748 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.81□□□□□ -0.04
CLDN8P56748 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN8P56748 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN8P56748 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN8P56748 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN8P56748 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLDN8P56748 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.81□□□□□ -0.04
CLDN8P56748 AL589739.1-201ENST00000607720 493 ntBASIC14.81□□□□□ -0.04
CLDN8P56748 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLDN8P56748 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.81□□□□□ -0.04
CLDN8P56748 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms