Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.9□□□□□ -0.02
PRIM2P49643 AC127383.1-201ENST00000444697 1800 ntBASIC14.9□□□□□ -0.02
PRIM2P49643 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PRIM2P49643 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PRIM2P49643 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.9□□□□□ -0.02
PRIM2P49643 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PRIM2P49643 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
PRIM2P49643 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 FAM58DP-201ENST00000428076 619 ntBASIC14.9□□□□□ -0.02
PRIM2P49643 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.9□□□□□ -0.02
PRIM2P49643 AC023141.5-201ENST00000458585 616 ntBASIC14.9□□□□□ -0.02
PRIM2P49643 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.9□□□□□ -0.02
PRIM2P49643 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.9□□□□□ -0.02
PRIM2P49643 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PRIM2P49643 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.9□□□□□ -0.02
PRIM2P49643 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.9□□□□□ -0.02
PRIM2P49643 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 AC112693.3-201ENST00000624819 1983 ntBASIC14.9□□□□□ -0.02
PRIM2P49643 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PRIM2P49643 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PRIM2P49643 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
PRIM2P49643 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.9□□□□□ -0.02
PRIM2P49643 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.9□□□□□ -0.02
PRIM2P49643 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PRIM2P49643 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
PRIM2P49643 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.89□□□□□ -0.03
PRIM2P49643 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.89□□□□□ -0.03
PRIM2P49643 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.89□□□□□ -0.03
PRIM2P49643 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.89□□□□□ -0.03
PRIM2P49643 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PRIM2P49643 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.89□□□□□ -0.03
PRIM2P49643 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PRIM2P49643 MIR1233-2-201ENST00000408138 82 ntBASIC14.89□□□□□ -0.03
PRIM2P49643 MIR1233-1-201ENST00000408722 82 ntBASIC14.89□□□□□ -0.03
PRIM2P49643 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.89□□□□□ -0.03
PRIM2P49643 AC254562.1-201ENST00000417586 456 ntBASIC14.89□□□□□ -0.03
PRIM2P49643 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.89□□□□□ -0.03
PRIM2P49643 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.89□□□□□ -0.03
PRIM2P49643 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PRIM2P49643 AC093520.2-201ENST00000561830 333 ntBASIC14.89□□□□□ -0.03
PRIM2P49643 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.89□□□□□ -0.03
PRIM2P49643 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.89□□□□□ -0.03
PRIM2P49643 AC009093.7-201ENST00000623853 1223 ntBASIC14.89□□□□□ -0.03
PRIM2P49643 AC134684.3-201ENST00000641758 218 ntBASIC14.89□□□□□ -0.03
PRIM2P49643 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.89□□□□□ -0.03
PRIM2P49643 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.89□□□□□ -0.03
PRIM2P49643 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.89□□□□□ -0.03
PRIM2P49643 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PRIM2P49643 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.89□□□□□ -0.03
PRIM2P49643 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRIM2P49643 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRIM2P49643 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PRIM2P49643 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRIM2P49643 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRIM2P49643 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRIM2P49643 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PRIM2P49643 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PRIM2P49643 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms