Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.36■□□□□ 0.05
SLC1A6P48664 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.36■□□□□ 0.05
SLC1A6P48664 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.36■□□□□ 0.05
SLC1A6P48664 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.36■□□□□ 0.05
SLC1A6P48664 AL135744.1-201ENST00000565098 629 ntBASIC15.36■□□□□ 0.05
SLC1A6P48664 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
SLC1A6P48664 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.36■□□□□ 0.05
SLC1A6P48664 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SLC1A6P48664 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SLC1A6P48664 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
SLC1A6P48664 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC1A6P48664 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SLC1A6P48664 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC1A6P48664 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC1A6P48664 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC1A6P48664 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC1A6P48664 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
SLC1A6P48664 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC1A6P48664 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC1A6P48664 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC1A6P48664 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC1A6P48664 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.36■□□□□ 0.05
SLC1A6P48664 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC1A6P48664 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
SLC1A6P48664 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC1A6P48664 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SLC1A6P48664 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC1A6P48664 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC1A6P48664 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC1A6P48664 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A6P48664 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A6P48664 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC1A6P48664 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A6P48664 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A6P48664 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
SLC1A6P48664 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC1A6P48664 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A6P48664 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A6P48664 HLA-H-201ENST00000383620 1096 ntBASIC15.35■□□□□ 0.05
SLC1A6P48664 TFAMP1-201ENST00000412727 736 ntBASIC15.35■□□□□ 0.05
SLC1A6P48664 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SLC1A6P48664 AC007967.2-201ENST00000432613 625 ntBASIC15.35■□□□□ 0.05
SLC1A6P48664 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC1A6P48664 FAAHP1-202ENST00000446499 1238 ntBASIC15.35■□□□□ 0.05
SLC1A6P48664 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SLC1A6P48664 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.35■□□□□ 0.05
SLC1A6P48664 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.35■□□□□ 0.05
SLC1A6P48664 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.35■□□□□ 0.05
SLC1A6P48664 AC026979.3-201ENST00000607315 403 ntBASIC15.35■□□□□ 0.05
SLC1A6P48664 AL513190.1-201ENST00000621254 727 ntBASIC15.35■□□□□ 0.05
SLC1A6P48664 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC1A6P48664 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SLC1A6P48664 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
SLC1A6P48664 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A6P48664 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A6P48664 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC1A6P48664 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC1A6P48664 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A6P48664 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SLC1A6P48664 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.35■□□□□ 0.05
SLC1A6P48664 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SLC1A6P48664 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A6P48664 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.35■□□□□ 0.05
SLC1A6P48664 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SLC1A6P48664 AC104581.4-201ENST00000623126 3052 ntBASIC15.35■□□□□ 0.05
SLC1A6P48664 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
SLC1A6P48664 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC1A6P48664 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SLC1A6P48664 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SLC1A6P48664 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SLC1A6P48664 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SLC1A6P48664 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A6P48664 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A6P48664 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC1A6P48664 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 AZGP1P1-201ENST00000411909 902 ntBASIC15.34■□□□□ 0.05
SLC1A6P48664 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC1A6P48664 AL671277.1-201ENST00000429656 993 ntBASIC15.34■□□□□ 0.05
SLC1A6P48664 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A6P48664 AC034105.1-201ENST00000563488 319 ntBASIC15.34■□□□□ 0.05
SLC1A6P48664 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC1A6P48664 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC1A6P48664 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A6P48664 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC1A6P48664 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A6P48664 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC1A6P48664 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms