Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
BRCC3P46736 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 AL365203.3-201ENST00000609742 2057 ntBASIC16.47■□□□□ 0.23
BRCC3P46736 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
BRCC3P46736 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.47■□□□□ 0.23
BRCC3P46736 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.47■□□□□ 0.23
BRCC3P46736 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.47■□□□□ 0.23
BRCC3P46736 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 AL138709.1-201ENST00000614840 1693 ntBASIC16.47■□□□□ 0.23
BRCC3P46736 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.47■□□□□ 0.23
BRCC3P46736 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.47■□□□□ 0.23
BRCC3P46736 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 FAM86MP-201ENST00000340703 885 ntBASIC16.47■□□□□ 0.23
BRCC3P46736 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
BRCC3P46736 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.47■□□□□ 0.23
BRCC3P46736 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.47■□□□□ 0.23
BRCC3P46736 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 FAM197Y7-201ENST00000432892 766 ntBASIC16.47■□□□□ 0.23
BRCC3P46736 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.47■□□□□ 0.23
BRCC3P46736 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.47■□□□□ 0.23
BRCC3P46736 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.47■□□□□ 0.23
BRCC3P46736 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.47■□□□□ 0.23
BRCC3P46736 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.47■□□□□ 0.23
BRCC3P46736 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.47■□□□□ 0.23
BRCC3P46736 RHOXF1P1-202ENST00000635473 501 ntBASIC16.47■□□□□ 0.23
BRCC3P46736 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.47■□□□□ 0.23
BRCC3P46736 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
BRCC3P46736 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
BRCC3P46736 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.47■□□□□ 0.23
BRCC3P46736 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BRCC3P46736 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.47■□□□□ 0.23
BRCC3P46736 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRCC3P46736 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.46■□□□□ 0.23
BRCC3P46736 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BRCC3P46736 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRCC3P46736 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.46■□□□□ 0.23
BRCC3P46736 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.46■□□□□ 0.23
BRCC3P46736 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.46■□□□□ 0.23
BRCC3P46736 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRCC3P46736 AC008894.3-201ENST00000624324 3103 ntBASIC16.46■□□□□ 0.23
BRCC3P46736 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
BRCC3P46736 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
BRCC3P46736 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRCC3P46736 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
BRCC3P46736 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.46■□□□□ 0.23
BRCC3P46736 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.46■□□□□ 0.23
BRCC3P46736 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRCC3P46736 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRCC3P46736 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BRCC3P46736 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.46■□□□□ 0.23
BRCC3P46736 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRCC3P46736 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
BRCC3P46736 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BRCC3P46736 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.46■□□□□ 0.23
BRCC3P46736 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.46■□□□□ 0.23
BRCC3P46736 CNN2P8-201ENST00000421872 913 ntBASIC16.46■□□□□ 0.23
BRCC3P46736 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.46■□□□□ 0.23
BRCC3P46736 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
BRCC3P46736 AC078819.1-201ENST00000547454 765 ntBASIC16.46■□□□□ 0.23
BRCC3P46736 AC012085.1-201ENST00000548270 765 ntBASIC16.46■□□□□ 0.23
BRCC3P46736 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.46■□□□□ 0.23
BRCC3P46736 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.46■□□□□ 0.23
BRCC3P46736 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BRCC3P46736 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.46■□□□□ 0.23
BRCC3P46736 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
BRCC3P46736 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.46■□□□□ 0.23
BRCC3P46736 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.46■□□□□ 0.23
BRCC3P46736 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.46■□□□□ 0.23
BRCC3P46736 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
BRCC3P46736 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
BRCC3P46736 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.46■□□□□ 0.23
BRCC3P46736 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.46■□□□□ 0.23
BRCC3P46736 AC007787.1-201ENST00000588095 1583 ntBASIC16.46■□□□□ 0.23
BRCC3P46736 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.46■□□□□ 0.23
BRCC3P46736 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BRCC3P46736 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.45■□□□□ 0.22
BRCC3P46736 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BRCC3P46736 AC011270.2-201ENST00000624293 2550 ntBASIC16.45■□□□□ 0.22
BRCC3P46736 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.45■□□□□ 0.22
BRCC3P46736 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BRCC3P46736 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.45■□□□□ 0.22
BRCC3P46736 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.45■□□□□ 0.22
BRCC3P46736 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BRCC3P46736 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms