Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.07■□□□□ 0.32
USP8P40818 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.07■□□□□ 0.32
USP8P40818 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.07■□□□□ 0.32
USP8P40818 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
USP8P40818 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
USP8P40818 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.07■□□□□ 0.32
USP8P40818 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.07■□□□□ 0.32
USP8P40818 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.07■□□□□ 0.32
USP8P40818 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 AC013268.4-201ENST00000637413 2228 ntBASIC17.06■□□□□ 0.32
USP8P40818 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
USP8P40818 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
USP8P40818 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.06■□□□□ 0.32
USP8P40818 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.06■□□□□ 0.32
USP8P40818 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
USP8P40818 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.06■□□□□ 0.32
USP8P40818 AZGP1P1-201ENST00000411909 902 ntBASIC17.06■□□□□ 0.32
USP8P40818 SPDYE7P-202ENST00000420373 878 ntBASIC17.06■□□□□ 0.32
USP8P40818 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.06■□□□□ 0.32
USP8P40818 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.06■□□□□ 0.32
USP8P40818 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.06■□□□□ 0.32
USP8P40818 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.06■□□□□ 0.32
USP8P40818 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.06■□□□□ 0.32
USP8P40818 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.06■□□□□ 0.32
USP8P40818 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
USP8P40818 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 AP001059.3-201ENST00000619053 235 ntBASIC17.06■□□□□ 0.32
USP8P40818 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.06■□□□□ 0.32
USP8P40818 AC079781.4-201ENST00000641908 219 ntBASIC17.06■□□□□ 0.32
USP8P40818 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
USP8P40818 CICP14-201ENST00000629111 2732 ntBASIC17.06■□□□□ 0.32
USP8P40818 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 SNX18-202ENST00000343017 3140 ntBASIC17.06■□□□□ 0.32
USP8P40818 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.06■□□□□ 0.32
USP8P40818 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.06■□□□□ 0.32
USP8P40818 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.06■□□□□ 0.32
USP8P40818 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
USP8P40818 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.06■□□□□ 0.32
USP8P40818 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.05■□□□□ 0.32
USP8P40818 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.05■□□□□ 0.32
USP8P40818 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.05■□□□□ 0.32
USP8P40818 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.05■□□□□ 0.32
USP8P40818 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.05■□□□□ 0.32
USP8P40818 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.05■□□□□ 0.32
USP8P40818 AC007967.4-201ENST00000614700 386 ntBASIC17.05■□□□□ 0.32
USP8P40818 AC023511.2-201ENST00000618803 211 ntBASIC17.05■□□□□ 0.32
USP8P40818 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
USP8P40818 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
USP8P40818 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.05■□□□□ 0.32
USP8P40818 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
USP8P40818 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
USP8P40818 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.05■□□□□ 0.32
USP8P40818 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.05■□□□□ 0.32
USP8P40818 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP8P40818 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.05■□□□□ 0.32
USP8P40818 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP8P40818 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.04■□□□□ 0.32
USP8P40818 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP8P40818 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP8P40818 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP8P40818 AC009090.5-201ENST00000624886 2285 ntBASIC17.04■□□□□ 0.32
USP8P40818 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms