Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMPD1P17405 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SMPD1P17405 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMPD1P17405 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMPD1P17405 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SMPD1P17405 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMPD1P17405 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SMPD1P17405 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMPD1P17405 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMPD1P17405 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.12■□□□□ 0.33
SMPD1P17405 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.12■□□□□ 0.33
SMPD1P17405 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.12■□□□□ 0.33
SMPD1P17405 AC004466.1-201ENST00000599515 1080 ntBASIC17.12■□□□□ 0.33
SMPD1P17405 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.12■□□□□ 0.33
SMPD1P17405 AC007663.3-201ENST00000609632 465 ntBASIC17.12■□□□□ 0.33
SMPD1P17405 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMPD1P17405 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.12■□□□□ 0.33
SMPD1P17405 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMPD1P17405 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMPD1P17405 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SMPD1P17405 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SMPD1P17405 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMPD1P17405 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMPD1P17405 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.12■□□□□ 0.33
SMPD1P17405 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.12■□□□□ 0.33
SMPD1P17405 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMPD1P17405 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMPD1P17405 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMPD1P17405 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.12■□□□□ 0.33
SMPD1P17405 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SMPD1P17405 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMPD1P17405 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMPD1P17405 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.11■□□□□ 0.33
SMPD1P17405 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.11■□□□□ 0.33
SMPD1P17405 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
SMPD1P17405 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.11■□□□□ 0.33
SMPD1P17405 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMPD1P17405 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMPD1P17405 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMPD1P17405 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMPD1P17405 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMPD1P17405 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMPD1P17405 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.11■□□□□ 0.33
SMPD1P17405 AC009090.5-201ENST00000624886 2285 ntBASIC17.11■□□□□ 0.33
SMPD1P17405 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMPD1P17405 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.11■□□□□ 0.33
SMPD1P17405 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SMPD1P17405 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.11■□□□□ 0.33
SMPD1P17405 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMPD1P17405 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMPD1P17405 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SMPD1P17405 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
SMPD1P17405 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SMPD1P17405 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.11■□□□□ 0.33
SMPD1P17405 NKAIN1P1-201ENST00000435754 582 ntBASIC17.11■□□□□ 0.33
SMPD1P17405 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMPD1P17405 HIST2H2BB-201ENST00000449108 381 ntBASIC17.11■□□□□ 0.33
SMPD1P17405 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.11■□□□□ 0.33
SMPD1P17405 AC044849.1-201ENST00000519737 1188 ntBASIC17.11■□□□□ 0.33
SMPD1P17405 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.11■□□□□ 0.33
SMPD1P17405 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.11■□□□□ 0.33
SMPD1P17405 AC106820.3-201ENST00000561653 397 ntBASIC17.11■□□□□ 0.33
SMPD1P17405 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.11■□□□□ 0.33
SMPD1P17405 ZACNP1-201ENST00000612259 710 ntBASIC17.11■□□□□ 0.33
SMPD1P17405 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SMPD1P17405 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SMPD1P17405 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SMPD1P17405 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.11■□□□□ 0.33
SMPD1P17405 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMPD1P17405 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SMPD1P17405 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMPD1P17405 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMPD1P17405 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.11■□□□□ 0.33
SMPD1P17405 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMPD1P17405 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SMPD1P17405 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SMPD1P17405 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.1■□□□□ 0.33
SMPD1P17405 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.1■□□□□ 0.33
SMPD1P17405 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.1■□□□□ 0.33
SMPD1P17405 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMPD1P17405 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMPD1P17405 CYP2T1P-202ENST00000641596 2535 ntBASIC17.1■□□□□ 0.33
SMPD1P17405 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMPD1P17405 TNRC18P3-201ENST00000441896 2691 ntBASIC17.1■□□□□ 0.33
SMPD1P17405 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.1■□□□□ 0.33
SMPD1P17405 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
SMPD1P17405 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMPD1P17405 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMPD1P17405 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SMPD1P17405 HLA-K-203ENST00000430151 1046 ntBASIC17.1■□□□□ 0.33
SMPD1P17405 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.1■□□□□ 0.33
SMPD1P17405 CHMP1AP1-201ENST00000445563 662 ntBASIC17.1■□□□□ 0.33
SMPD1P17405 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.1■□□□□ 0.33
SMPD1P17405 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.1■□□□□ 0.33
SMPD1P17405 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
SMPD1P17405 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.1■□□□□ 0.33
SMPD1P17405 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.1■□□□□ 0.33
SMPD1P17405 AC005730.2-201ENST00000564549 1184 ntBASIC17.1■□□□□ 0.33
SMPD1P17405 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.1■□□□□ 0.33
SMPD1P17405 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms