Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLTAP09496 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CLTAP09496 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CLTAP09496 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLTAP09496 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLTAP09496 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLTAP09496 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.07■□□□□ 0.32
CLTAP09496 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLTAP09496 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.07■□□□□ 0.32
CLTAP09496 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLTAP09496 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLTAP09496 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLTAP09496 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLTAP09496 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.07■□□□□ 0.32
CLTAP09496 AC099063.4-201ENST00000641099 1602 ntBASIC17.07■□□□□ 0.32
CLTAP09496 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLTAP09496 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLTAP09496 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLTAP09496 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLTAP09496 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLTAP09496 CLK3P2-201ENST00000427566 1453 ntBASIC17.06■□□□□ 0.32
CLTAP09496 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLTAP09496 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CLTAP09496 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLTAP09496 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLTAP09496 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.06■□□□□ 0.32
CLTAP09496 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLTAP09496 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLTAP09496 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLTAP09496 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLTAP09496 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.06■□□□□ 0.32
CLTAP09496 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLTAP09496 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLTAP09496 KRT18P43-201ENST00000469825 1281 ntBASIC17.06■□□□□ 0.32
CLTAP09496 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.06■□□□□ 0.32
CLTAP09496 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.06■□□□□ 0.32
CLTAP09496 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.06■□□□□ 0.32
CLTAP09496 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CLTAP09496 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLTAP09496 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.06■□□□□ 0.32
CLTAP09496 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.06■□□□□ 0.32
CLTAP09496 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLTAP09496 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLTAP09496 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.06■□□□□ 0.32
CLTAP09496 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLTAP09496 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLTAP09496 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLTAP09496 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.06■□□□□ 0.32
CLTAP09496 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.06■□□□□ 0.32
CLTAP09496 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLTAP09496 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.05■□□□□ 0.32
CLTAP09496 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CLTAP09496 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLTAP09496 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CLTAP09496 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.05■□□□□ 0.32
CLTAP09496 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.05■□□□□ 0.32
CLTAP09496 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CLTAP09496 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 DGCR5-201ENST00000399539 862 ntBASIC17.05■□□□□ 0.32
CLTAP09496 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
CLTAP09496 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.05■□□□□ 0.32
CLTAP09496 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.05■□□□□ 0.32
CLTAP09496 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.05■□□□□ 0.32
CLTAP09496 AC104596.2-201ENST00000512793 793 ntBASIC17.05■□□□□ 0.32
CLTAP09496 AL596325.1-201ENST00000563991 1082 ntBASIC17.05■□□□□ 0.32
CLTAP09496 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.05■□□□□ 0.32
CLTAP09496 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.05■□□□□ 0.32
CLTAP09496 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.05■□□□□ 0.32
CLTAP09496 MIR8072-201ENST00000614241 80 ntBASIC17.05■□□□□ 0.32
CLTAP09496 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.05■□□□□ 0.32
CLTAP09496 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.05■□□□□ 0.32
CLTAP09496 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 AL121723.1-201ENST00000445194 1519 ntBASIC17.05■□□□□ 0.32
CLTAP09496 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CLTAP09496 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.05■□□□□ 0.32
CLTAP09496 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.05■□□□□ 0.32
CLTAP09496 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CLTAP09496 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.05■□□□□ 0.32
CLTAP09496 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CLTAP09496 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLTAP09496 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.05■□□□□ 0.32
CLTAP09496 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.04■□□□□ 0.32
CLTAP09496 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLTAP09496 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLTAP09496 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms