Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SPARCP09486 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPARCP09486 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SPARCP09486 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPARCP09486 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
SPARCP09486 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPARCP09486 AC126365.1-201ENST00000578585 1514 ntBASIC13.94□□□□□ -0.18
SPARCP09486 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.94□□□□□ -0.18
SPARCP09486 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SPARCP09486 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.94□□□□□ -0.18
SPARCP09486 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.94□□□□□ -0.18
SPARCP09486 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SPARCP09486 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
SPARCP09486 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
SPARCP09486 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.93□□□□□ -0.18
SPARCP09486 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SPARCP09486 AC023024.2-201ENST00000623561 1993 ntBASIC13.93□□□□□ -0.18
SPARCP09486 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SPARCP09486 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.93□□□□□ -0.18
SPARCP09486 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.93□□□□□ -0.18
SPARCP09486 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.93□□□□□ -0.18
SPARCP09486 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.93□□□□□ -0.18
SPARCP09486 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 MIR4469-201ENST00000583919 79 ntBASIC13.93□□□□□ -0.18
SPARCP09486 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.93□□□□□ -0.18
SPARCP09486 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.93□□□□□ -0.18
SPARCP09486 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.93□□□□□ -0.18
SPARCP09486 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SPARCP09486 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SPARCP09486 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SPARCP09486 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.93□□□□□ -0.18
SPARCP09486 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.93□□□□□ -0.18
SPARCP09486 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SPARCP09486 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.93□□□□□ -0.18
SPARCP09486 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
SPARCP09486 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SPARCP09486 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SPARCP09486 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SPARCP09486 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SPARCP09486 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SPARCP09486 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SPARCP09486 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
SPARCP09486 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.92□□□□□ -0.18
SPARCP09486 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.92□□□□□ -0.18
SPARCP09486 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.92□□□□□ -0.18
SPARCP09486 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.92□□□□□ -0.18
SPARCP09486 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.92□□□□□ -0.18
SPARCP09486 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.92□□□□□ -0.18
SPARCP09486 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.92□□□□□ -0.18
SPARCP09486 AL627223.1-201ENST00000416693 442 ntBASIC13.92□□□□□ -0.18
SPARCP09486 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.92□□□□□ -0.18
SPARCP09486 FAM58DP-201ENST00000428076 619 ntBASIC13.92□□□□□ -0.18
SPARCP09486 RBPMS2P1-201ENST00000437762 623 ntBASIC13.92□□□□□ -0.18
SPARCP09486 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.92□□□□□ -0.18
SPARCP09486 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.92□□□□□ -0.18
SPARCP09486 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.92□□□□□ -0.18
SPARCP09486 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.92□□□□□ -0.18
SPARCP09486 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 AL513210.1-201ENST00000629608 234 ntBASIC13.92□□□□□ -0.18
SPARCP09486 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.92□□□□□ -0.18
SPARCP09486 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SPARCP09486 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms