Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.97■□□□□ 0.31
VTNP04004 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.97■□□□□ 0.31
VTNP04004 AC092850.2-201ENST00000623821 2697 ntBASIC16.97■□□□□ 0.31
VTNP04004 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.97■□□□□ 0.31
VTNP04004 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.97■□□□□ 0.31
VTNP04004 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VTNP04004 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VTNP04004 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VTNP04004 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VTNP04004 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.96■□□□□ 0.31
VTNP04004 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VTNP04004 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VTNP04004 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.96■□□□□ 0.31
VTNP04004 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VTNP04004 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VTNP04004 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VTNP04004 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VTNP04004 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
VTNP04004 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.96■□□□□ 0.31
VTNP04004 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.96■□□□□ 0.31
VTNP04004 AL590640.2-201ENST00000457038 527 ntBASIC16.96■□□□□ 0.31
VTNP04004 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VTNP04004 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VTNP04004 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VTNP04004 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.96■□□□□ 0.31
VTNP04004 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.96■□□□□ 0.31
VTNP04004 AC078819.1-201ENST00000547454 765 ntBASIC16.96■□□□□ 0.31
VTNP04004 AC012085.1-201ENST00000548270 765 ntBASIC16.96■□□□□ 0.31
VTNP04004 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.96■□□□□ 0.31
VTNP04004 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.96■□□□□ 0.31
VTNP04004 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.96■□□□□ 0.31
VTNP04004 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.96■□□□□ 0.31
VTNP04004 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
VTNP04004 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VTNP04004 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VTNP04004 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VTNP04004 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VTNP04004 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VTNP04004 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
VTNP04004 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
VTNP04004 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
VTNP04004 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
VTNP04004 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.95■□□□□ 0.3
VTNP04004 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.95■□□□□ 0.3
VTNP04004 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 AC007787.1-201ENST00000588095 1583 ntBASIC16.95■□□□□ 0.3
VTNP04004 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.95■□□□□ 0.3
VTNP04004 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.95■□□□□ 0.3
VTNP04004 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.95■□□□□ 0.3
VTNP04004 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.95■□□□□ 0.3
VTNP04004 ACTBP11-201ENST00000436287 1126 ntBASIC16.95■□□□□ 0.3
VTNP04004 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.95■□□□□ 0.3
VTNP04004 AL355994.2-201ENST00000447882 704 ntBASIC16.95■□□□□ 0.3
VTNP04004 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
VTNP04004 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.95■□□□□ 0.3
VTNP04004 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.95■□□□□ 0.3
VTNP04004 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.95■□□□□ 0.3
VTNP04004 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.95■□□□□ 0.3
VTNP04004 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.95■□□□□ 0.3
VTNP04004 AC009542.2-202ENST00000619004 1067 ntBASIC16.95■□□□□ 0.3
VTNP04004 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.95■□□□□ 0.3
VTNP04004 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
VTNP04004 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.95■□□□□ 0.3
VTNP04004 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VTNP04004 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.95■□□□□ 0.3
VTNP04004 TNRC18P3-201ENST00000441896 2691 ntBASIC16.94■□□□□ 0.3
VTNP04004 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VTNP04004 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VTNP04004 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VTNP04004 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.94■□□□□ 0.3
VTNP04004 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.94■□□□□ 0.3
VTNP04004 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.94■□□□□ 0.3
VTNP04004 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VTNP04004 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
VTNP04004 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VTNP04004 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.94■□□□□ 0.3
VTNP04004 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms