Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.77■□□□□ 0.28
CHRNA1P02708 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CHRNA1P02708 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.77■□□□□ 0.28
CHRNA1P02708 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CHRNA1P02708 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.77■□□□□ 0.28
CHRNA1P02708 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CHRNA1P02708 POM121L8P-201ENST00000417732 1281 ntBASIC16.77■□□□□ 0.28
CHRNA1P02708 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.77■□□□□ 0.28
CHRNA1P02708 FAM8A4P-201ENST00000435433 1213 ntBASIC16.77■□□□□ 0.28
CHRNA1P02708 POM121L9P-203ENST00000441984 1285 ntBASIC16.77■□□□□ 0.28
CHRNA1P02708 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 HSPB1P2-201ENST00000448722 546 ntBASIC16.77■□□□□ 0.28
CHRNA1P02708 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.77■□□□□ 0.28
CHRNA1P02708 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.77■□□□□ 0.28
CHRNA1P02708 SAMD11P1-201ENST00000571429 661 ntBASIC16.77■□□□□ 0.28
CHRNA1P02708 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CHRNA1P02708 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.77■□□□□ 0.28
CHRNA1P02708 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.77■□□□□ 0.28
CHRNA1P02708 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHRNA1P02708 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.77■□□□□ 0.28
CHRNA1P02708 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.77■□□□□ 0.27
CHRNA1P02708 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHRNA1P02708 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHRNA1P02708 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CHRNA1P02708 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHRNA1P02708 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHRNA1P02708 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.77■□□□□ 0.27
CHRNA1P02708 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
CHRNA1P02708 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.77■□□□□ 0.27
CHRNA1P02708 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CHRNA1P02708 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.76■□□□□ 0.27
CHRNA1P02708 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA1P02708 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.76■□□□□ 0.27
CHRNA1P02708 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA1P02708 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.76■□□□□ 0.27
CHRNA1P02708 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA1P02708 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA1P02708 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA1P02708 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA1P02708 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.76■□□□□ 0.27
CHRNA1P02708 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CHRNA1P02708 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA1P02708 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA1P02708 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.76■□□□□ 0.27
CHRNA1P02708 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA1P02708 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
CHRNA1P02708 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
CHRNA1P02708 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.76■□□□□ 0.27
CHRNA1P02708 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.76■□□□□ 0.27
CHRNA1P02708 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.76■□□□□ 0.27
CHRNA1P02708 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.76■□□□□ 0.27
CHRNA1P02708 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.76■□□□□ 0.27
CHRNA1P02708 ACTG1P17-201ENST00000558391 1119 ntBASIC16.76■□□□□ 0.27
CHRNA1P02708 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA1P02708 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.76■□□□□ 0.27
CHRNA1P02708 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHRNA1P02708 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA1P02708 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.76■□□□□ 0.27
CHRNA1P02708 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHRNA1P02708 AC244452.3-201ENST00000636814 210 ntBASIC16.76■□□□□ 0.27
CHRNA1P02708 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHRNA1P02708 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA1P02708 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHRNA1P02708 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.76■□□□□ 0.27
CHRNA1P02708 AC046158.3-201ENST00000624947 2558 ntBASIC16.76■□□□□ 0.27
CHRNA1P02708 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
CHRNA1P02708 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHRNA1P02708 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CHRNA1P02708 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CHRNA1P02708 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CHRNA1P02708 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.75■□□□□ 0.27
CHRNA1P02708 AC009090.5-201ENST00000624886 2285 ntBASIC16.75■□□□□ 0.27
CHRNA1P02708 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.75■□□□□ 0.27
CHRNA1P02708 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHRNA1P02708 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms